DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaC and Map4k4

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_006496104.1 Gene:Map4k4 / 26921 MGIID:1349394 Length:1383 Species:Mus musculus


Alignment Length:373 Identity:131/373 - (35%)
Similarity:207/373 - (55%) Gaps:29/373 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AQLPDPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALKIQHYDEEHQVSIEEEYRTLRDYCDHP 71
            :.|.||...||:.|.:..|...:|::.:.:...::.|:|:....|:.:..|:.|...|:.|..|.
Mouse    16 SSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHR 80

  Fly    72 NLPEFYGVY-KLSKPNGPDEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYIIRETCRAAIE 135
            |:..:||.: |.|.|...|::|.|||:|..|:..|:|..  .....::|:.||||.||..|....
Mouse    81 NIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKN--TKGNTLKEDWIAYISREILRGLAH 143

  Fly   136 LNRNHVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDSTLGKRGTCIGSPCWMAPEVVSAMESREP 200
            |:.:||:||||:|.|:|||:|..|||.|||:|.|:|.|:|:|.|.||:|.||||||::..|:.:.
Mouse   144 LHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 208

  Fly   201 DITVRADVWALGITTIELADGKPPFADMHPTRAMFQIIRNPPPTLMRPTNWSQQINDFISESLEK 265
            ....|:|:|:.|||.||:|:|.||..||||.||:|.|.|||||.| :...||::...||...|.|
Mouse   209 TYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRL-KSKKWSKKFFSFIEGCLVK 272

  Fly   266 NAENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVKRFDEKPE 330
            |...||...::::|||:.:. .||.::|..:.:.::.:|..:....|.|      |.....|:.|
Mouse   273 NYMQRPSTEQLLKHPFIRDQ-PNERQVRIQLKDHIDRTRKKRGEKDETE------YEYSGSEEEE 330

  Fly   331 KMYPE---DLAALENPVDENII---------------ESLRHRILMGE 360
            :..||   :.:::.|...|:.:               |:||.:.|:.|
Mouse   331 EEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 112/273 (41%)
MYSc_Myo21 346..1022 CDD:276848 6/30 (20%)
Map4k4XP_006496104.1 Protein Kinases, catalytic domain 8..289 CDD:473864 112/275 (41%)
CNH 1065..1363 CDD:214481
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.