DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and unc-54

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_493596.1 Gene:unc-54 / 259839 WormBaseID:WBGene00006789 Length:1963 Species:Caenorhabditis elegans


Alignment Length:48 Identity:14/48 - (29%)
Similarity:20/48 - (41%) Gaps:12/48 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NKWVLTA------AHCTQGLDPSSLAVRLGSSEHATGGTLVGVLRTVE 124
            |.|..:|      ...|:.||.||....||.|      .::.:|||.:
 Worm   170 NSWFWSAVFHSRDVDLTERLDYSSAVAILGFS------LILAILRTFD 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 14/48 (29%)
MYSc_Myo21 346..1022 CDD:276848
unc-54NP_493596.1 Myosin_N 28..72 CDD:460670
MYSc_class_II 95..775 CDD:276951 14/48 (29%)
Myosin_tail_1 853..1932 CDD:460256
Blue background indicates that the domain is not in the aligned region.

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