DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and Plekhh3

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_666142.1 Gene:Plekhh3 / 217198 MGIID:2384950 Length:796 Species:Mus musculus


Alignment Length:491 Identity:103/491 - (20%)
Similarity:173/491 - (35%) Gaps:143/491 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LSKP--NGP--------DEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYIIRETCRAAIEL 136
            |::|  |||        :|.|.::.                 |:.:.||....|::..       
Mouse    61 LTQPTRNGPISDRLQGWEETWSLIP-----------------DKGLPEEDPDIIVKGW------- 101

  Fly   137 NRNHVLHRDIRGDNI---LLTKNGRVKLCDFGLSR-QVD--STLGKRGTCIGSPCWMAPEVVSAM 195
                 |:|:.||...   ||.:...     |.|:| .:|  |:.||....:||....:...|:..
Mouse   102 -----LYREPRGGGARPWLLPRRAW-----FVLTRDSLDQFSSSGKGARRLGSLVLTSLCSVTGP 156

  Fly   196 ESREPD-----ITV---------------RADVWALGITTIELADGKPPFADMHPTRAMFQII-- 238
            |.|..:     :||               .|:.|  |:...|:...|.|...  ||:.:.:.|  
Mouse   157 ERRPKETGLWSVTVSGRKHSIRLCSPRQAEAERW--GVALREVIASKAPLET--PTQLLLRDIQE 217

  Fly   239 -------------RNPPPTLMRPTNWSQQINDFISESLEKNAEN---RPMMVEMVEHPFLTELIE 287
                         |||   ::|.|: |......:....|.:|..   .|:..|.|......:.:|
Mouse   218 SCGDPEAVALIYRRNP---ILRHTS-SALYAPLLPLPYEVSAPGPGYAPLREEAVRLFLALQALE 278

  Fly   288 NEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVKRFDEKPEKMYPEDLAALENPVDENIIESL 352
            ........:..:|:..||:..|  :.|||:.   :.:....|..  |..|.|.::|.      :|
Mouse   279 GARRPGPLMQGVLQTCRDLPAL--QDELFLQ---LAKQTSGPAG--PPGLPATQDPA------TL 330

  Fly   353 RH-RILMGESYSF------IGDILLSLNSNEIKQEFPQEFHAKY-RF----KSRSENQPHIFSVA 405
            |: ::|...|.:|      .|.:|..|...|  |..|....|:| ||    ..|:..:..:.|:|
Mouse   331 RYWQLLTCMSCTFRPGGAVRGHLLGHLERTE--QALPDSELAEYARFIRKALGRTRGRELVPSLA 393

  Fly   406 DIA----YQDML---HHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGA----TGRVESS 459
            :|:    .|::|   |........:|.:|::.....||.|:..|......|..|    .|..|.:
Mouse   394 EISALSRRQELLCTVHCPGAGACPVSIDSHTTAGEVARELVGRLGLARSRNAFALYEQRGAQERA 458

  Fly   460 IKAILMLVNAGTPVNN---------DSTRCVLQYCL 486
            :....::.:..|...|         ||..|..:.||
Mouse   459 LAGGTLVADVLTRFENLTSEEAGLEDSPDCGWRLCL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 51/253 (20%)
S_TKc 16..282 CDD:214567 51/253 (20%)
MYSc 327..1034 CDD:214580 44/192 (23%)
MYSc_Myo21 346..1022 CDD:276848 39/173 (23%)
Plekhh3NP_666142.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..71 5/9 (56%)
PH-like 84..208 CDD:302622 30/161 (19%)
PH 96..199 CDD:278594 25/121 (21%)
MyTH4 288..397 CDD:279165 31/123 (25%)
UBQ 409..>459 CDD:294102 11/49 (22%)
FERM_B-lobe 514..>553 CDD:298919
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 557..584
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..625
PH-like 660..747 CDD:302622
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 750..796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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