DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaC and Myo16

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_008769606.1 Gene:Myo16 / 192253 RGDID:621561 Length:1934 Species:Rattus norvegicus


Alignment Length:1612 Identity:364/1612 - (22%)
Similarity:625/1612 - (38%) Gaps:408/1612 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VFRAKELDND-----------------RIVALKIQHYDEEHQVSIEEEYRTLRDYCDHPNLPEFY 77
            |||:.|::.|                 |:...:|:.|.|..:|..::|                 
  Rat    17 VFRSHEMEIDQCLLESLPLGQRQRLVRRMRCEQIKAYYEREKVFQKQE----------------- 64

  Fly    78 GVYKLSKPNGPDEIWF-----------------VMEYCAGG----TAVDMVNKLLKLDRRMREEH 121
            |:.|..||....::.|                 |::....|    |.|.....||.|..|.....
  Rat    65 GLLKRIKPGKSQKVRFGLADMIQDAIIHHHDKEVLQLLKEGADPHTLVSSGGSLLHLCARYDNVF 129

  Fly   122 IAYIIRETCRAAIELNRNH--------------------VLHRDIRGDNILLTK-NGRVKLCDFG 165
            ||.::.:.     .:|.||                    ||...:.|.|:||.. ||.:.| |:.
  Rat   130 IAEVLIDR-----GVNVNHQDEDFWAPMHIACACDNPDIVLLLILAGANVLLQDVNGNIPL-DYA 188

  Fly   166 LSRQVDST-----LGKRGTCIGS--------PCWMAPEVVSAMESREPDITVRADVWALGITTIE 217
            :.....|.     |.:.|..:.|        |..|..:|...:.| ..|:..:.|.   |:|.:.
  Rat   189 VEGTESSAILLAYLDENGVDLNSLRQIKLQRPLSMLTDVRHFLSS-GGDVNEKNDD---GVTLLH 249

  Fly   218 LA-----------------------DGKPPFADMH-------PTRAMFQIIRNPPPTLMRPTNWS 252
            :|                       ||.  :..:|       .|.....:.....|.|:. .|..
  Rat   250 MACASGYKEVVLLLLEHGGDLNGMDDGY--WTPLHLAAKYGQTTLVKLLLAHQANPHLVN-CNGE 311

  Fly   253 QQINDFISESLEKNAENRPMMVE--MVEHPFLTELIENE--DEMRSDIAEM-LELSRDVKTLYKE 312
            :..:...|||:|:......:..|  |.|.|.:..|.:.|  :|:..|:.|: .:||..|..:.|:
  Rat   312 KPSDIAASESIEEMLLKAEIAWEERMKESPSVPSLAQEELYEEILHDLPELSSKLSPLVLPIAKQ 376

  Fly   313 PEL------FVD--RGYVKRFDE-------------KPEKMY------PEDLAALENPVDENIIE 350
            ..|      |.|  :|...:..:             |||::.      .:|||.|....|.:::.
  Rat   377 DSLLEKDIMFKDTTKGLCNQESQDGPPETSMVSSSSKPEQVQLTPPAPSDDLATLSELNDSSLLY 441

  Fly   351 SLRHRILMGESYSFIGDILLSLNSNEIKQEFP------QEFHAKYRFKSRSENQPHIFSVADIAY 409
            .::.|....:.::|||||.|.:|.   .:|.|      .:.:.....:......||:||.|:.|:
  Rat   442 EIQKRFGNDQIHTFIGDIFLLVNP---FKELPIYSTVVSQMYLSPTGQRSPSLPPHLFSCAERAF 503

  Fly   410 QDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSI--------KAILML 466
            ..:...:.||:|:||||..|||:..::.::|||          |.|..||.        .||.:|
  Rat   504 HRLFQERRPQNIILSGERGSGKTQASKQIMKHL----------TSRASSSCTMFDSRFKHAICIL 558

  Fly   467 V---NAGTPVNNDSTRCVLQYC-LTFGKTGK-MSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFY 526
            .   :|.|.:||.|: |::||. |.|.:..| ::||..:.|||||.|:......|.:|.||.:..
  Rat   559 EAFGHAKTTLNNVSS-CLIQYWELQFCQRRKHVTGARISTYMLEKPRLVAQPPGQGSFLIFSWLM 622

  Fly   527 DFINQQNQ--LKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDPEG-----NVERYREFENILRDI 584
            |.::.:.:  |...|..|   :||:.          :..|:|...     |.||..:.::.|..|
  Rat   623 DGLSAEEKCGLHLSNFCA---HRYVS----------QGMREDVSTAERSLNKERLADLKHALNVI 674

  Fly   585 DFNHKQLETVRKVLAAILNIGNIRFR--QNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIM 647
            .|:..::|.:..:|:|||:||:|:|.  .....|.|.:..::.::|::|:|...:...:||..|.
  Rat   675 GFSALEVENLFAILSAILHIGDIQFTALTEADSAFVSDLQLLEQVADMLQVSTDELASALTTDIQ 739

  Fly   648 -VKGGIAERRQYTTEEARDARDAVASTLYSRLVDFIINRINMNM-SFPRAVFGDTNAIIIHDMFG 710
             .||.:..|| :||:.|...||.:|.:|||||..|:||.:|..: |........|..|.|.|:||
  Rat   740 YFKGDVIIRR-HTTQIAAFYRDLLAKSLYSRLFGFLINTVNCCLQSQDEYKSLQTLDIGILDIFG 803

  Fly   711 FECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKT-ALDNLLTKPD 774
            ||.|.:|..|||.:|..||:|.::..:.:|:.|..|...|.:.........|:. .||....||.
  Rat   804 FEEFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETACSPGNQAGVLDFFFQKPS 868

  Fly   775 GLFYIIDDASRS-----------------CQDQDLIMDRVSEKHSQFVKKHTATEISVAHYTGRI 822
            |.|.::|:.|::                 ..:.:.:...:.:.:.....|......:|.||.||:
  Rat   869 GFFSLLDEESQAIWSVEPNLPRKLQGLLESSNTNAVYSPMKDGNGNVAFKGQGAAFTVMHYAGRV 933

  Fly   823 IYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYAL 887
            .|:.|...:.|:|.:...::...::|.:..|..:|.::|:..|:|...:.:.:.   ...||..|
  Rat   934 TYEIRGAVERNKDSLSQNLLFVMKTSENVVISHLFQSKLSPTGSLISSYPSFKF---GGHKSSLL 995

  Fly   888 NTLSAGCISQVN-NLRTLA--ANFRFTCLTLLKMLSQ-----------------NANL---GVHF 929
            :...|..:..|| |...|:  ...:.|| |.|:.|.:                 .|.|   ..||
  Rat   996 SKRIASSMVGVNKNYLELSKLLKKKGTC-TFLQRLERGDPATTASQLTKSLADITAKLQKGSPHF 1059

  Fly   930 VRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFDF----- 989
            :.|::.:....|..|....|..|::.||||..|...:.|:..|..|::||.||:.||...     
  Rat  1060 ILCVKPNTSQLPGVFDHFYVSAQLQYLGVLGLVRLFRYGYPVRPSFEDFLSRYEPLASVLLGEKK 1124

  Fly   990 DEPVEMTKDNCRLLFLRLKMEGWALGKTKVFLRYYNDEFLARLYELQVKKVIKVQSMMRALLARK 1054
            .:|.|   :.|||:..|.|::||.:|..||||:|:..:.|..|:....:|::..|.::|..|||:
  Rat  1125 GQPAE---ERCRLVLQRCKLQGWQMGVHKVFLKYWQVDQLGDLWLQMQRKIVTCQKVIRGFLARQ 1186

  Fly  1055 RVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSGQLNENTADFIRPFAKKWR 1119
            .                                       |:...|.:..|.|:  |:.|.:...
  Rat  1187 H---------------------------------------LLQRMSIKQQEVTS--IKSFLQSTE 1210

  Fly  1120 EKSI--FQVLLHYRA---ARFQDFVNLSQQVH--IYNQRMVAGLNKCTRAVPFERINMREVNSSQ 1177
            :.::  :..|:...|   ||..|  .|.::||  .:..|...|..:..     ::...|..:|:.
  Rat  1211 DMALKTYDALVIQNASDIAREHD--RLRKEVHAAYHRNRQEEGTKRAE-----DQGGCRHAHSNS 1268

  Fly  1178 LGPLPVPIKKMPFRLDQIPFYDTQYMVDPANSISRQAFPNQLLTQHMEDDEPWDSPLQRNPSM-- 1240
            : |:|:.:..:           .|.:..|:   ||.  |:......|:|.....||.::.|..  
  Rat  1269 V-PVPMAVDSL-----------AQALAGPS---SRS--PSLHSVFSMDDSTGLPSPRKQPPPKPK 1316

  Fly  1241 ----TSCALTYNAYK------KEQACQTNWDRMGESDNIYNQGYFRDPQQLRRNQMQMNMNAYNN 1295
                |..:.:|.|..      |:.|.:........||: |:......|::.:|           :
  Rat  1317 RDPNTRLSASYEAVSACLSATKDAASEALTRPRPHSDD-YSTMKKIPPRKPKR-----------S 1369

  Fly  1296 AYNSYNSNYNNQNWGVHRSGSRRNSLKGYA--------APPPPPP----------PMPSSNYYRN 1342
            .:...:.:| .:.||...||:.....|.:|        |.|...|          |:|..:|..:
  Rat  1370 PHTKLSGSY-EEIWGPRPSGTMGQVGKHHAPGTLGVQWASPDSMPQCTPQLPLHLPLPQGDYDDD 1433

  Fly  1343 NPNQQQRNYQQRSSYPPSDPVR-ELQNMARNEGDNSEDPPFNFKAMLRKTNY 1393
                             .:||. |:...|...|.:..|.|...:::..:..|
  Rat  1434 -----------------GEPVYIEMVGNAARAGGSETDSPDQGESVYEEMKY 1468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 67/355 (19%)
S_TKc 16..282 CDD:214567 67/355 (19%)
MYSc 327..1034 CDD:214580 217/801 (27%)
MYSc_Myo21 346..1022 CDD:276848 205/751 (27%)
Myo16XP_008769606.1 ANKYR 86..332 CDD:223738 47/258 (18%)
ANK 89..190 CDD:238125 23/106 (22%)
ANK repeat 114..145 CDD:293786 9/35 (26%)
ANK 142..297 CDD:238125 29/161 (18%)
ANK repeat 147..178 CDD:293786 6/30 (20%)
ANK repeat 180..210 CDD:293786 7/30 (23%)
ANK repeat 243..274 CDD:293786 3/33 (9%)
ANK repeat 276..307 CDD:293786 5/32 (16%)
MYSc 425..1161 CDD:214580 212/770 (28%)
MYSc_Myo16 437..1154 CDD:276844 205/751 (27%)
NYAP_N 1246..1603 CDD:292079 47/275 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25137at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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