DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and hum-7

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_001248880.1 Gene:hum-7 / 171650 WormBaseID:WBGene00002040 Length:1880 Species:Caenorhabditis elegans


Alignment Length:1172 Identity:280/1172 - (23%)
Similarity:486/1172 - (41%) Gaps:312/1172 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 SLEKNAENRPMMVEMVEHPFLTELIEN------EDEMRS----DIAEMLELSRDVKTLYKEPEL- 315
            |...:.||..:.:|:.:.....||||.      |.|.:|    |:.||:. :.|.:| |||..| 
 Worm    38 SFNPDCENDTVHLEVHKRCTTEELIEKVLAGRAELEGQSVQDFDLFEMMG-TPDGQT-YKERRLD 100

  Fly   316 -----------------------------FVDRGY---------------------VKRFDEKPE 330
                                         |..|||                     :.:|..:|:
 Worm   101 PGEYPVAVQAIWSRLPVVVDSATPKNRFVFRHRGYRAATGGTRFGSAEVASSIDAFLTKFLVQPQ 165

  Fly   331 KMYPEDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFP--QEFHAKYRFKS 393
            .....||..|....::.::::||.|...|..|::||.||:::|....   ||  ...:|:..|:|
 Worm   166 DREYADLCNLPELTEQTLLDNLRERFANGHIYTYIGPILVAVNPFCF---FPIYNPKYARLYFQS 227

  Fly   394 R--SENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRV 456
            :  ....||||::||:.|.:||..||.|.:|:||||.|||:.:...|:.||..|  ..:|:||  
 Worm   228 KRLGSLPPHIFAIADVCYHNMLRIKENQCVVISGESGSGKTESTNHLMSHLISL--SQKGSTG-- 288

  Fly   457 ESSIKAILMLV--------NAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTD 513
             .|.:..|:..        ||.|..||:|:|......:.:.:.|.:|||...:|:|||.|:....
 Worm   289 -CSTEQTLLSAGPVLEAFGNAVTLTNNNSSRFGKFIKINYRENGMVSGANVEIYLLEKSRIIFQT 352

  Fly   514 GTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDP---EGNVERYR 575
            ..:.|:|:|||..:..:::.: |:|.|....:|:||             .:::|   ||..|| .
 Worm   353 KGERNYHVFYYLLEGADEEER-KKYFLLKPHDYKYL-------------NQNEPFALEGVNER-N 402

  Fly   576 EFENI---LRDIDFNHKQLETVRKVLAAILNIGNIRF-RQNGKYAE----VENTDIVSRIAELLR 632
            ||:.:   :..:.|..|..:|:..:::|:|.:|||.: :::|.:::    :||.::|..:|.||.
 Worm   403 EFDRLRHAMSSVGFCAKTQQTIFGIISAVLLLGNITYIKRHGYHSDESGYIENEEVVDLVANLLH 467

  Fly   633 VDEKKFMWSLT--NFIMVKGGIAERRQYTTEEARDARDAVASTLYSRLVDFIINRINMNMSFPRA 695
            :.....|.:||  ..:|....:..|  |:..||.:.|||:|..:|:.|..:|:.|||..:.....
 Worm   468 IKTDTLMQALTMKRHVMKTETVVLR--YSVSEATNTRDAMAKCIYNSLFHYIVLRINQALLKKDF 530

  Fly   696 VFGDTNAIIIHDMFGFE-----CFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTI 755
            ..|....|.|.|:||||     |   |..|||.||..||::|.::||.||..|..|...|.|...
 Worm   531 SAGKGYYIGILDIFGFEDVGSQC---NSFEQLCINYANEKLQSYFNQHIFQFEQEEYLKEGISWT 592

  Fly   756 NLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQDLIMDRVSEKHSQFVKKHTATE-------- 812
            |:.:.||...:....:||.|:..::|:.|......|   |.:..|.:||:|.:...|        
 Worm   593 NIEYTDNTECVQLFQSKPYGILRLVDEESNINNGTD---DSMLAKLNQFLKNNEYYETPQKKEPA 654

  Fly   813 ISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMF-------------------- 857
            ..||||.|::.|....|.:.|:|.:..:::...:||....:..:.                    
 Worm   655 FIVAHYAGKVKYQITGFREKNKDLMRQDVLNALKSSTSSVMKTLLGIDPVAVHRWNVLRSVFRAM 719

  Fly   858 ------TNQLTK---AGNL-----------------------------------TMPFEAVQHK- 877
                  |.:|.|   ||:|                                   |..|..:::: 
 Worm   720 NAFKQSTRKLQKSESAGHLRVMDSIVTSPRRGSDSALSAFLRGELRCEVPDFCDTSMFNTIRNQA 784

  Fly   878 -----DESERKSYALNTLSAGCISQVNNLRTLA-------ANFRFTCLTLLKMLSQNANLGVHFV 930
                 .:|:.|...|.:|.  .:.:....|.||       ..|.:   :|.:::|..||...:|:
 Worm   785 RRTPAGKSDDKMSLLKSLQ--ILKEAIGGRRLAKKPSSVSKQFEY---SLTRLMSTLANATPYFI 844

  Fly   931 RCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFD-FDEPVE 994
            |||:::.:.....|..:::.:|::..|:|:||..|:.|:|.|:.:..|:::|:.|..: .|..|:
 Worm   845 RCIKSNNDKIANHFDDNIILRQLRYTGMLETVRIRRAGYSVRIEYPSFVQQYRILLRNGRDSTVD 909

  Fly   995 MTK---------DNCRLLFLRLKMEGWALGKTKVFLRYYNDEFL-ARLYELQVKKVIKVQSMMRA 1049
            ..|         ||..:.:          |..|:|:|......| ..|:...::.:..:|...|.
 Worm   910 DVKEYIHSHASIDNDNIQY----------GTNKIFMRDAEKLILDDHLHRTIMQSIDTLQRWFRT 964

  Fly  1050 LLARK---RVKGGKVFKLGKKGPEHHDVAASKIQKAFRG--FRDRVRLPPLVNEKSGQLNENTAD 1109
            :||||   |:|.|.:                |||...||  .|..||...|           .|.
 Worm   965 MLARKRYLRMKEGII----------------KIQALIRGSFARAEVRKKAL-----------AAQ 1002

  Fly  1110 FIRPFAKKWREKSIFQVLLHYRAARFQDFVNLSQQVHIYNQRMVAGLNKCTRAVPFERINMREVN 1174
            .|:...||::::              |.::::.:.        |..|....|.....:       
 Worm  1003 TIQCNWKKYKQR--------------QKYLSIRES--------VIALQSAYRGASVRK------- 1038

  Fly  1175 SSQLGPLP-----VPIKKMPFRLDQIPFYD-TQYMVDPANSISRQAFPNQLLTQHMEDDEPWDSP 1233
              ::|.:|     :.:||.|||:.::...: |::.:...:|::..|.        .:||...|..
 Worm  1039 --RVGEIPKGNGALNVKKSPFRVRKVHAVNLTKFDLSDPSSLAAFAL--------SDDDSDSDKS 1093

  Fly  1234 LQ 1235
            .|
 Worm  1094 TQ 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 4/19 (21%)
S_TKc 16..282 CDD:214567 4/19 (21%)
MYSc 327..1034 CDD:214580 215/832 (26%)
MYSc_Myo21 346..1022 CDD:276848 208/800 (26%)
hum-7NP_001248880.1 RA 28..134 CDD:214612 21/97 (22%)
MYSc 163..936 CDD:214580 212/818 (26%)
MYSc_Myo9 181..936 CDD:276836 208/800 (26%)
C1 1234..1284 CDD:237996
C1 1475..1523 CDD:237996
RhoGAP 1540..1727 CDD:295372
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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