DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and Myo9a

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_599162.2 Gene:Myo9a / 171296 RGDID:621395 Length:2626 Species:Rattus norvegicus


Alignment Length:1012 Identity:245/1012 - (24%)
Similarity:437/1012 - (43%) Gaps:228/1012 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 KEPELFVDRGYVKRFDEKPEKMYPEDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSN 375
            :|....::||::    .:|::...:||.:|.:..::.::|:||:|....:.|:::|.||:::|..
  Rat   129 EERRRMMERGFL----PQPQQKDFDDLCSLPDLNEKTLLENLRNRFKHEKIYTYVGSILIAINPF 189

  Fly   376 EIKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIK 440
            :....:..::...|......:.:|||::|||:||..||..|:.|.||:||||.|||:.:...||.
  Rat   190 KFLPIYNPKYVKMYDNHQLGKLEPHIYAVADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIH 254

  Fly   441 HLCYLGDGNRGATGRVESSI----KAILMLVNAGTPVNNDSTRCVLQYCLTFGK--------TGK 493
            ||..|  ..:|....||..|    ..:....||.|..||:|:|        |||        ||.
  Rat   255 HLTAL--SQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSR--------FGKFIQVNYQETGT 309

  Fly   494 MSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPS 558
            :.||....|:|||.|:...:..:.|:|:|||.....:::.:| .::||....|.:|.   ::...
  Rat   310 VLGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGASEEERL-AFHLKQPEEYHFLN---QITKK 370

  Fly   559 KLKYRRDD-----------PEGNVERYREFENI---LRDIDFNHKQLETVRKVLAAILNIGNIRF 609
            .|:...||           .||...|: :||.:   :..:.|..|....:..:|:|||::|||.:
  Rat   371 PLRQSWDDYCYDSEPDCFTVEGEDLRH-DFERLQLAMEMVGFLPKTRRQIFSLLSAILHLGNISY 434

  Fly   610 RQ---NGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAERRQYTTEEARDARDAVA 671
            ::   .....::.|.:::..::|||.|.|:....:|.....|..|......|...||...|:::|
  Rat   435 KKKTYRDDSIDICNPEVLPIVSELLEVKEEMLFEALVTRKTVTVGEKLILPYKLAEAVTVRNSMA 499

  Fly   672 STLYSRLVDFIINRINMNMSFPRAVFGDTNAIIIH--DMFGFECFNRNGLEQLMINTLNEQMQYH 734
            .:|||.|.|:|:.|||..:...:.:..||..:.|.  |:||||.:..|..||..||..||::|::
  Rat   500 KSLYSALFDWIVFRINHALLNSKDLEKDTKTLSIGVLDIFGFEDYENNSFEQFCINFANERLQHY 564

  Fly   735 YNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQ-DQDLIMDRVS 798
            :||.||..|..|...|.|...|:::.||...::.:..||.||.:::|:.|...| ....::|:..
  Rat   565 FNQHIFKLEQEEYRTEGISWHNIDYIDNTCCINLISKKPTGLLHLLDEESNFPQATNQTLLDKFK 629

  Fly   799 EKHSQ--FVKKHTATE--ISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDE-------- 851
            .:|.:  :::.....|  ..:.||.|::.|..:.|.:.|.|.:.|:::...|||.:.        
  Rat   630 HQHEENSYIEFPAVMEPAFIIKHYAGKVKYGVKDFREKNTDHMRPDIVALLRSSRNAFVSGMTGI 694

  Fly   852 --------SIMLMFTNQLT------------KAG-NLTMP---------FEAVQH---------- 876
                    :::..|...:.            |:| :.|.|         |..:||          
  Rat   695 DPVAVFRWAVLRAFFRAVVAFREAGKRHIQRKSGHDDTTPCTILKSMDSFSFLQHPVHQRSLEIL 759

  Fly   877 ---KDES---ERKS--------YALNTL------------------------------------- 890
               |:|.   .||:        ..:|||                                     
  Rat   760 QRCKEEKYSITRKNPRTPLSDLQGMNTLNEKNQHDTFDIAWNVRTGIRQSRLPTNNTSLLDKDGI 824

  Fly   891 -----SAGCISQVNNLRTLAANFR-----------------FTCLTLLKMLSQNANLGVH----- 928
                 |:..:.:.:.:.|...|||                 .|.|||...::::. |.:|     
  Rat   825 FANSASSKLLERAHGILTRNKNFRSKPVLPKHLLEVNSLKHLTRLTLQDRITKSL-LHLHKKKKP 888

  Fly   929 ------------------------FVRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGF 969
                                    ||:|||::.|..|..|...:|.:|::..|:|:||..||.|:
  Rat   889 PSISAQFQVSLSKLMETLDQAEPYFVKCIRSNAEKLPLRFSDALVLRQLRYTGMLETVRIRQSGY 953

  Fly   970 SSRLPFDEFLRRYQFLAFDFDEPVEMTKDNCRLLFLRLKM--EGWALGKTKVFLRYYNDEFLARL 1032
            ||:..|.:|:..:..|   ..:.:..:|.|.:..|.::.:  :.:.:|||.|||:.:..:.|..|
  Rat   954 SSKYSFQDFVSHFHVL---LPQHIIPSKFNIQDFFRKININPDNYQVGKTMVFLKEHERQHLQDL 1015

  Fly  1033 YELQV-KKVIKVQSMMRALLARKRVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLV 1096
            ...:| :::|.:|...|.||:|::..             |...|:..||:.:|.:.::.::....
  Rat  1016 LHQEVLRRIILLQRWFRVLLSRQQFL-------------HLRQASVIIQRFWRNYLNQKQVRNAA 1067

  Fly  1097 NEKSGQLNENTADFIRPFAKKWREKSIFQVLLHYRAA 1133
            .||...:..:.|..::   ..||.....|..|..|||
  Rat  1068 VEKDAFIMASAASLLQ---ASWRAHLERQRYLELRAA 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
S_TKc 16..282 CDD:214567
MYSc 327..1034 CDD:214580 220/894 (25%)
MYSc_Myo21 346..1022 CDD:276848 213/863 (25%)
Myo9aNP_599162.2 Actin-binding. /evidence=ECO:0000250 908..919 4/10 (40%)
Neck or regulatory domain. /evidence=ECO:0000250 1022..1163 21/96 (22%)
Tail. /evidence=ECO:0000250 1164..2589
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1221..1276
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1360..1397
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1562..1602
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1618..1673
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1689..1726
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1765..1784
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1872..1907
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2365..2385
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2449..2527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2552..2614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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