DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo7a

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_004912319.1 Gene:myo7a / 100491335 XenbaseID:XB-GENE-494060 Length:2212 Species:Xenopus tropicalis


Alignment Length:886 Identity:218/886 - (24%)
Similarity:402/886 - (45%) Gaps:128/886 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 ISESLEKNAENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVK 323
            :.|:|||: :.:..::..|........:...|.:..|:....|....|..:.|    ..|.|.::
 Frog     7 VEETLEKD-QGKWALLRNVNQALKPSTLLPGDYVWLDLKTGREFDVPVGAVVK----LCDSGQIQ 66

  Fly   324 RFDEK-------PEK------MYPEDLAALENPV---DENIIESLRHRILM-----------GES 361
            ..|::       |:.      |:|..:..:|:.:   |.|....||:.::.           |.:
 Frog    67 VLDDEGNEHWISPQNASHIKPMHPTSIHGVEDMIRLGDLNEAGILRNLLIRYREHLIYTNCGGRT 131

  Fly   362 YSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGE 426
            |:  |.||:::|..::...:..:....|..:...|..||||::||..|.:|..:.:.|..::|||
 Frog   132 YT--GSILVAVNPYQLLPIYTPDQIRLYTNRKIGEMPPHIFAIADNCYFNMQRNNKDQCCIISGE 194

  Fly   427 SYSGKSTNARLLIKHLCYLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKT 491
            |.:||:.:.:|:::.|..:...:.....:|..:...:....||.|..|::|:|......:.|.|.
 Frog   195 SGAGKTESTKLILQFLAAISGQHSWIEQQVLEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNKK 259

  Fly   492 GKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVP 556
            |.:.||....|:|||.||......:.|:||||.....::.: |.|:.:|....:|.||.:.    
 Frog   260 GAIEGAKIEQYLLEKSRVCRQAQDERNYHIFYCMLKGMSPE-QKKKLSLGQASDYNYLCMG---- 319

  Fly   557 PSKLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRKVLAAILNIGNIRFR----QNGKYAE 617
                |....|...:.:.|....:.::.:.|...:...:.::|||||::||:|:.    .|....|
 Frog   320 ----KCTTCDGRDDSKEYANIRSAMKVLMFTDTENWEISRLLAAILHMGNLRYEARMYDNLDACE 380

  Fly   618 VENTDIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAERRQYTTEEARDARDAVASTLYSRLVDFI 682
            |..:..::..|.||.|..::.|..||:..::..|.......:.|:|.|.|||....:|.||..:|
 Frog   381 VVYSTSLTTAATLLEVGPQELMNCLTSRTIITRGETVSTPLSMEQALDVRDAFVKGIYGRLFVWI 445

  Fly   683 INRINMNM-----SFPRAVFGDTNAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFIS 742
            :::||..:     :.|:|.   ..:|.:.|:||||.|..|..|||.||..||.:|..:.:.:|..
 Frog   446 VDKINAAIYRPLSNEPKAA---RRSIGLLDIFGFENFTVNSFEQLCINFANENLQQFFVRHVFKL 507

  Fly   743 EMLEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQDLIM-DRVSEKH--SQF 804
            |..|...|:|:..::.|.||:.|||.:..||..:..:||:.|:..:..|..| ::::.:|  :.|
 Frog   508 EQEEYNLENINWQHIEFTDNQDALDMIAIKPMNIISLIDEESKFPKGTDTTMLNKLNVQHKLNTF 572

  Fly   805 V---KKHTATEISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGN 866
            .   |.:..|:..:.|:.|.:.|:|:.|.:.|||.:..::|:...|:.::.|..:|...:.... 
 Frog   573 YIPPKNNYETQFGINHFAGIVYYETKGFLEKNRDTLHGDIIQLVHSAKNKFIKQIFQADVAMGA- 636

  Fly   867 LTMPFEAVQHKDESERKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVR 931
                        |:.::|                 .||::.|:.:...|::.||.   ....|||
 Frog   637 ------------ETRKRS-----------------PTLSSQFKRSLELLMRTLSV---CQPFFVR 669

  Fly   932 CIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFL------AFDFD 990
            ||:.:...||..|..::..:|::..|:::|:..|:.|:..|..|.||:.||:.|      |:...
 Frog   670 CIKPNEYKKPMLFDRELCVRQLRYSGMMETIRIRRAGYPIRYTFVEFVDRYRVLMPGVKPAYKQG 734

  Fly   991 EPVEMTKDNCRLLFLRL--KMEGWALGKTKVFLRYYNDEFLARLYELQ-----VKKVIKVQSMMR 1048
            :    .:..|..:...:  |.:.|.:||||:||:.::|    .|.|::     ..|||.:|.::|
 Frog   735 D----LRGTCERIAESVLGKDDDWQIGKTKIFLKDHHD----MLLEIERDKAITDKVILIQKVVR 791

  Fly  1049 ALLARKRVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDR 1089
            ....|     ....|:.|        ||..||:.:||...|
 Frog   792 GFKDR-----SNFLKIRK--------AALLIQRCWRGHNCR 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 5/22 (23%)
MYSc_Myo21 346..1022 CDD:276848 181/709 (26%)
myo7aXP_004912319.1 MYSc_Myo7 108..764 CDD:276832 180/706 (25%)
IQ 801..822 CDD:197470 9/27 (33%)
PTZ00121 <883..>995 CDD:173412
MyTH4 1052..1288 CDD:214535
FERM1_F1_Myosin-VII 1292..1390 CDD:340612
B41 1294..1509 CDD:214604
FERM_C1_MyoVII 1503..1601 CDD:270019
SH3 1602..1666 CDD:473055
MyTH4 1744..1893 CDD:214535
FERM2_F1_Myosin-VII 1898..1995 CDD:340613
B41 1900..2112 CDD:214604
FERM_C2_MyoVII 2108..2203 CDD:270020
Blue background indicates that the domain is not in the aligned region.

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