DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and nrk

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_031747384.1 Gene:nrk / 100486469 XenbaseID:XB-GENE-952099 Length:1237 Species:Xenopus tropicalis


Alignment Length:407 Identity:140/407 - (34%)
Similarity:215/407 - (52%) Gaps:28/407 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YLPYAQLPDPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALKIQHYDEEHQVSIEEEYRTLRDY 67
            |:..|.|.:|...||:.|.:..|...:|::.:.:...::.|:|:.:..||.:..|:.|...|:.|
 Frog    12 YIDLASLREPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMNVTEEEEEEIKLEINMLKKY 76

  Fly    68 CDHPNLPEFYGVY-KLSKPNGPDEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYIIRETCR 131
            ..|.|:..:||.: :.......|::|.|||||..|:..|:|.|  ......:|:.||||.||..|
 Frog    77 SHHRNIATYYGAFVRKGLAGQDDQLWLVMEYCGAGSVTDLVKK--TKGNCFKEDWIAYICREVLR 139

  Fly   132 AAIELNRNHVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDSTLGKRGTCIGSPCWMAPEVVSAME 196
            ....|:.:||:||||:|.|:|||:|..|||.|||:|.|:|.|:|:|.|.||:|.||||||::..|
 Frog   140 GLAHLHAHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDE 204

  Fly   197 SREPDITVRADVWALGITTIELADGKPPFADMHPTRAMFQIIRNPPPTLMRPTNWSQQINDFISE 261
            :.:.....|:|:|:||||.||:|:|.||..||||.||:|.|.|||||.| :...||::..:|:..
 Frog   205 NPDSTYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKL-KSRKWSKKCINFVDS 268

  Fly   262 SLEKNAENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVKRFD 326
            .|.||..:||....:::|.|:.:| :||..:|..:.:.|:.:|..|....|      .||.....
 Frog   269 CLVKNYSHRPSTDTLLKHAFVRDL-QNERHIRIMLKDHLDRARKKKGEKDE------NGYEYSGS 326

  Fly   327 EKPEKMYPEDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEF------ 385
            |:.:....||.....:.|:.....:||...|.          |...|.|......||:.      
 Frog   327 EEEDDELNEDEGEPSSIVNLPGESTLRREFLR----------LQQENKNRSDPPRPQQLQQQQLK 381

  Fly   386 -HAKYRFKSRSENQPHI 401
             ..||:.:.::|.|..|
 Frog   382 DQEKYKMQLQAERQKRI 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 110/273 (40%)
S_TKc 16..282 CDD:214567 108/266 (41%)
MYSc 327..1034 CDD:214580 17/82 (21%)
MYSc_Myo21 346..1022 CDD:276848 13/63 (21%)
nrkXP_031747384.1 STKc_MAP4K4_6_N 8..289 CDD:270806 112/279 (40%)
CNH 919..1215 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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