DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt10 and wnt10b

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001072771.1 Gene:wnt10b / 780228 XenbaseID:XB-GENE-482664 Length:388 Species:Xenopus tropicalis


Alignment Length:441 Identity:173/441 - (39%)
Similarity:248/441 - (56%) Gaps:78/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IVMIILACCTRWLYG------LPDG-----RATCRSVPGLTKDQVELCYKASDVTAAALEGLDMA 107
            |:.|.:..|:|.|..      ||:.     ...|.::|||:|.|:.||.:..||||:||:|:.:|
 Frog    13 ILAIAIWLCSRVLCNDILGLKLPNDPILTPNTVCLTLPGLSKRQMGLCVRNPDVTASALQGIQIA 77

  Fly   108 IRECQIQFQWHRWNCSSLSTKSRNPHASSLLKKGYRESAFAFAISAAGVAHSVARACSQGRLMSC 172
            |.|||.|.:..|||||:|.|..:.||.|::||:|:|||||||::.||||.||||.|||.|:|..|
 Frog    78 IHECQHQLKGQRWNCSTLETMGKMPHDSAILKRGFRESAFAFSLLAAGVMHSVATACSLGKLQGC 142

  Fly   173 GCDPTINRKTLNKNLRQSLDKEKKQFLQYLE-TNQILTPEEEKKYERSKIASRWKWGGCSHNMDF 236
            ||:  ..|:...:.:|..|::.:.|.|..:: ..:.|||...:..|.|. ...|:||||.|.::|
 Frog   143 GCE--WKRRGTEEKIRLKLNQLQLQALSKVKGLPRDLTPLLRETPEPSP-QDTWEWGGCKHELEF 204

  Fly   237 GVEYSKLFLDCREKAGDIQSKINLHNNHAGRIAVSNNMEFRCKCHGMSGSCQLKTCWKSAPDFHI 301
            |.::|:.|||.||...||.:::.:|||..||.||:.||:.||||||.|||||.||||...|||..
 Frog   205 GEKFSRDFLDSRESPRDIHARMRIHNNRVGRQAVTENMKRRCKCHGTSGSCQFKTCWHVTPDFRA 269

  Fly   302 VGKVLKHQFRKAILVDQSNLGNGEPVVVLKRARNKKSNGGSGSGSTSPDLDSTDASGGHDDGGTG 366
            ||.:::.:.::|:.|:               :|||      .||:..|.|               
 Frog   270 VGTLMRDKLQRAVFVN---------------SRNK------NSGAFHPRL--------------- 298

  Fly   367 DSETRRHDELGVERGTRQPSADKNAARMARKLETSLFYYQRSPNFCERDLGADIQGTVGRKCNRN 431
                                   |..|:|::    |.|:::||:|||:|...|..||.||.||:.
 Frog   299 -----------------------NKKRLAKE----LVYFEKSPDFCEKDPRVDSPGTQGRVCNKT 336

  Fly   432 TTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQWCCNVECEECHVEEWISIC 482
            :...|.|.||||||||:.::|.|.|||:|:|.|||.|.||||.|.:.:::|
 Frog   337 SQQMDNCASLCCGRGHNILMQTRRERCNCRFHWCCYVMCEECRVTQLVNVC 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 154/384 (40%)
wnt10bNP_001072771.1 wnt 52..388 CDD:278536 163/402 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 352 1.000 Domainoid score I999
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20721
Inparanoid 1 1.050 357 1.000 Inparanoid score I2178
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1241694at2759
OrthoFinder 1 1.000 - - FOG0004126
OrthoInspector 1 1.000 - - oto102637
Panther 1 1.100 - - LDO PTHR12027
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5519
SonicParanoid 1 1.000 - - X2869
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.100

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