DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt10 and Wnt5a

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_006252726.1 Gene:Wnt5a / 64566 RGDID:69250 Length:391 Species:Rattus norvegicus


Alignment Length:466 Identity:137/466 - (29%)
Similarity:198/466 - (42%) Gaps:129/466 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GSSSSSNSSSNNLVATPATSRHCNLHLIVMIILACCTRWLYGLPD-----------GRATCRSVP 80
            |::..:.||...|:|.      ........:::...:.|..|:.:           .:..|..:.
  Rat    26 GTAGGAMSSKFFLMAL------ATFFSFAQVVIEANSWWSLGMNNPVQMSEVYIIGAQPLCSQLA 84

  Fly    81 GLTKDQVELCYKASDVTAAALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHASSLLKKGYRES 145
            ||::.|.:||:...|......||....|:|||.||:..|||||::...|   ....:::.|.||:
  Rat    85 GLSQGQKKLCHLYQDHMQYIGEGAKTGIKECQYQFRHRRWNCSTVDNTS---VFGRVMQIGSRET 146

  Fly   146 AFAFAISAAGVAHSVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQYLETNQILTP 210
            ||.:|:|||||.::::|||.:|.|.:|||......|.|.::                        
  Rat   147 AFTYAVSAAGVVNAMSRACREGELSTCGCSRAARPKDLPRD------------------------ 187

  Fly   211 EEEKKYERSKIASRWKWGGCSHNMDFGVEYSKLFLDCREK-----AGDIQSK---INLHNNHAGR 267
                          |.||||..|:|:|..::|.|:|.||:     .|..:|.   :|||||.|||
  Rat   188 --------------WLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYESARILMNLHNNEAGR 238

  Fly   268 IAVSNNMEFRCKCHGMSGSCQLKTCWKSAPDFHIVGKVLKHQFRKAILVDQSNLGNGEPVVVLKR 332
            ..|.|..:..|||||:||||.|||||....||..||..||.::..|..:..::.|....|     
  Rat   239 RTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAMRLNSRGKLVQV----- 298

  Fly   333 ARNKKSNGGSGSGSTSPDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKNAARMARK 397
              |.:.|        ||                                |.|             
  Rat   299 --NSRFN--------SP--------------------------------TTQ------------- 308

  Fly   398 LETSLFYYQRSPNFCERDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAERCHCKF 462
               .|.|...||::|.|:......||.||.||:.:...|||..:|||||:.|....:.|||||||
  Rat   309 ---DLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTVQTERCHCKF 370

  Fly   463 QWCCNVECEEC 473
            .|||.|:|::|
  Rat   371 HWCCYVKCKKC 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 123/391 (31%)
Wnt5aXP_006252726.1 Wnt_Wnt5a 80..391 CDD:381721 130/406 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345748
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48513
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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