DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt10 and wnt3

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001108024.1 Gene:wnt3 / 569420 ZFINID:ZDB-GENE-081003-1 Length:355 Species:Danio rerio


Alignment Length:398 Identity:134/398 - (33%)
Similarity:184/398 - (46%) Gaps:97/398 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 CRSVPGLTKDQVELCYKASDVTAAALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHASSLLKK 140
            |.|:|||...|:..|....::..:..||:.:.|:|||.||:..||||:::  |........:|.|
Zfish    45 CGSIPGLVPKQLRFCRNYIEIMPSVAEGVKLGIQECQHQFRGRRWNCTTI--KDSLAIFGPVLDK 107

  Fly   141 GYRESAFAFAISAAGVAHSVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQYLETN 205
            ..|||||..||::||||.:|.|:|::|....||||                              
Zfish   108 ATRESAFVHAIASAGVAFAVTRSCAEGTSTMCGCD------------------------------ 142

  Fly   206 QILTPEEEKKYERSKIASRWKWGGCSHNMDFGVEYSKLFLDCREKAGDIQSKINLHNNHAGRIAV 270
                     .:.:......|||||||.:.:|||..|:.|.|.||...|.:|.:|.|||.|||:.:
Zfish   143 ---------SHHKGPPGEGWKWGGCSEDAEFGVLVSREFADARENRPDARSAMNRHNNEAGRMTI 198

  Fly   271 SNNMEFRCKCHGMSGSCQLKTCWKSAPDFHIVGKVLKHQFRKAILVDQSNLGNGEPVVVLKRARN 335
            ..||..||||||:||||::||||.:.|||.::|..||.::..|          .|.||    .::
Zfish   199 LENMHLRCKCHGLSGSCEVKTCWWAQPDFRLLGDYLKDKYDSA----------SEMVV----EKH 249

  Fly   336 KKSNGGSGSGSTSPDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKNAARMARKLET 400
            ::|.|.                          .||.|                ...|......|.
Zfish   250 RESRGW--------------------------VETLR----------------AKYAFFKHPTER 272

  Fly   401 SLFYYQRSPNFCERDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQWC 465
            .|.||:.||||||.:......||..|.||.::...:||..|||||||:...::|.|:|||.|.||
Zfish   273 DLVYYEGSPNFCEPNPETGSFGTRDRACNVSSHGIEGCDLLCCGRGHNTRTEKRKEKCHCIFHWC 337

  Fly   466 CNVECEEC 473
            |.|.|:||
Zfish   338 CYVSCQEC 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 124/383 (32%)
wnt3NP_001108024.1 WNT1 47..355 CDD:128408 133/396 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.