DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt10 and Wnt10a

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001101697.1 Gene:Wnt10a / 316527 RGDID:1307015 Length:417 Species:Rattus norvegicus


Alignment Length:415 Identity:166/415 - (40%)
Similarity:237/415 - (57%) Gaps:57/415 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 DGRATCRSVPGLTKDQVELCYKASDVTAAALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHAS 135
            :....|.::|||::.|:|:|.:..||.|:|::|:.:||.|||.||:..|||||||.|:::.|:.|
  Rat    56 NANTVCLTLPGLSRRQMEVCVRHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKVPYES 120

  Fly   136 SLLKKGYRESAFAFAISAAGVAHSVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQ 200
            .:..:|:||||||:||:||||.|:|:.||:.|:|.:||||  .:|:...:..|:.|.:.:...||
  Rat   121 PIFSRGFRESAFAYAIAAAGVVHAVSNACALGKLKACGCD--ASRRGDEEAFRRKLHRLQLDALQ 183

  Fly   201 YLETNQILTPEEEKKYERSK-IASRWKWGGCSHNMDFGVEYSKLFLDCREKAGDIQSKINLHNNH 264
            ..:......||.......|. :...|:|||||.::.||..:||.|||.||...||.:::.||||.
  Rat   184 RGKGLSHGVPEHPAIPPASPGLQDSWEWGGCSPDVGFGERFSKDFLDSREPHRDIHARMRLHNNR 248

  Fly   265 AGRIAVSNNMEFRCKCHGMSGSCQLKTCWKSAPDFHIVGKVLKHQFRKAILVDQSNLGNG--EPV 327
            .||.||..||..:|||||.||||||||||:..|:|..||.:|:::|.:|.|:...|...|  || 
  Rat   249 VGRQAVMENMRRKCKCHGTSGSCQLKTCWQVTPEFRTVGALLRNRFHRATLIRPHNRNGGQLEP- 312

  Fly   328 VVLKRARNKKSNGGSGSGSTSPDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKNAA 392
                        |.:|:.|.:|..........|.|                              
  Rat   313 ------------GLAGAPSPAPGTPGLRRRASHSD------------------------------ 335

  Fly   393 RMARKLETSLFYYQRSPNFCERDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAER 457
                     |.|:::||:||||:...|..|||||.||:::|..|.|.|:||||||:.:.|.|:||
  Rat   336 ---------LVYFEKSPDFCEREPRLDSAGTVGRLCNKSSTGPDSCGSMCCGRGHNILRQTRSER 391

  Fly   458 CHCKFQWCCNVECEECHVEEWISIC 482
            |||:|.|||.|.||||.:.||:|:|
  Rat   392 CHCRFHWCCFVVCEECRITEWVSVC 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 152/386 (39%)
Wnt10aNP_001101697.1 wnt 67..417 CDD:278536 163/404 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345766
Domainoid 1 1.000 326 1.000 Domainoid score I1151
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I2376
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1241694at2759
OrthoFinder 1 1.000 - - FOG0004126
OrthoInspector 1 1.000 - - otm44693
orthoMCL 1 0.900 - - OOG6_107889
Panther 1 1.100 - - O PTHR12027
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2869
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.900

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