DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt10 and Wnt10b

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001101581.1 Gene:Wnt10b / 315294 RGDID:1304988 Length:389 Species:Rattus norvegicus


Alignment Length:460 Identity:176/460 - (38%)
Similarity:246/460 - (53%) Gaps:101/460 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SRHCNLHLIVMIILACCTRWLYG------LP-----DGRATCRSVPGLTKDQVELCYKASDVTAA 99
            ||...|.|..::.||..:|.|..      ||     .....|.::.||:|.|:.||.::.||||:
  Rat     7 SRPPPLGLAGLLFLALFSRALSNEILGLKLPGEPPLTANTVCLTLSGLSKRQLGLCLRSPDVTAS 71

  Fly   100 ALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHASSLLKKGYRESAFAFAISAAGVAHSVARAC 164
            ||:||.:|:.|||.|.:..|||||:|....|.||.|::||:|:|||||:|::.||||.|:||.||
  Rat    72 ALQGLHIAVHECQHQLRDQRWNCSALEGGGRLPHHSAILKRGFRESAFSFSMLAAGVMHAVATAC 136

  Fly   165 SQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQYLETNQILTPEEEKKYERSKIA------- 222
            |.|:|:||||    ..|...:.     |:.:.:.||.    |.|:  ..|.:..|:.:       
  Rat   137 SLGKLVSCGC----GWKGSGEQ-----DRLRAKLLQL----QALS--RGKSFPHSQPSPIPGSVP 186

  Fly   223 -----SRWKWGGCSHNMDFGVEYSKLFLDCREKAGDIQSKINLHNNHAGRIAVSNNMEFRCKCHG 282
                 ..|:||||:|:||||.::|:.|||.||...|||:::.:|||..||..|:.|::.:|||||
  Rat   187 GPGPQDTWEWGGCNHDMDFGEKFSRDFLDSREAPRDIQARMRIHNNRVGRQVVTENLKRKCKCHG 251

  Fly   283 MSGSCQLKTCWKSAPDFHIVGKVLKHQFRKAILVDQSNLGNGEPVVVLKRARNKKSNGGSGSGST 347
            .|||||.||||::||:|..:|..|:.:..:||.:|..|             ||        ||..
  Rat   252 TSGSCQFKTCWRAAPEFRAIGAALRERLGRAIFIDTHN-------------RN--------SGVF 295

  Fly   348 SPDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKNAARMARKLETSLFYYQRSPNFC 412
            .|.|                                :|          |:|...|.|:::||:||
  Rat   296 QPRL--------------------------------RP----------RRLSGELVYFEKSPDFC 318

  Fly   413 ERDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQWCCNVECEECHVEE 477
            |||......||.||.||:.:...|||.||||||||:.:.|.|.|||||:|.|||.|.|:||.|.|
  Rat   319 ERDPALGSPGTRGRACNKTSRLLDGCGSLCCGRGHNVLRQTRVERCHCRFHWCCYVLCDECKVTE 383

  Fly   478 WISIC 482
            |:::|
  Rat   384 WVNVC 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 154/395 (39%)
Wnt10bNP_001101581.1 Wnt_Wnt10b 45..389 CDD:381730 166/422 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345772
Domainoid 1 1.000 326 1.000 Domainoid score I1151
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20721
Inparanoid 1 1.050 329 1.000 Inparanoid score I2376
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1241694at2759
OrthoFinder 1 1.000 - - FOG0004126
OrthoInspector 1 1.000 - - otm44693
orthoMCL 1 0.900 - - OOG6_107889
Panther 1 1.100 - - LDO PTHR12027
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2869
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.900

Return to query results.
Submit another query.