DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt10 and Wnt5b

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001093959.1 Gene:Wnt5b / 282582 RGDID:628850 Length:372 Species:Rattus norvegicus


Alignment Length:461 Identity:131/461 - (28%)
Similarity:192/461 - (41%) Gaps:141/461 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LIVMIILACCTRWLYGLPDGRA---------------------TCRSVPGLTKDQVELCYKASDV 96
            |:::.:.|..:.|...|.|..:                     .|..:|||:..|.:||....:.
  Rat    17 LLLLFVAALLSSWAQLLTDANSWWSLALNPVQRPEMFIIGAQPVCSQLPGLSPGQRKLCQLYQEH 81

  Fly    97 TAAALEGLDMAIRECQIQFQWHRWNCS---SLSTKSRNPHASSLLKKGYRESAFAFAISAAGVAH 158
            .:...||....|||||.||:..|||||   :||...|      :::.|.||:||.:|:|||||.:
  Rat    82 MSYIGEGAKTGIRECQHQFRQRRWNCSTVDNLSVFGR------VMQIGSRETAFTYAVSAAGVVN 140

  Fly   159 SVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQYLETNQILTPEEEKKYERSKIAS 223
            :::|||.:|.|.:|||......|.|.::                                     
  Rat   141 AISRACREGELSTCGCSRAARPKDLPRD------------------------------------- 168

  Fly   224 RWKWGGCSHNMDFGVEYSKLFLDCRE------KAGDIQSK--INLHNNHAGRIAVSNNMEFRCKC 280
             |.||||..|:::|..::|.|:|.||      |..:.|.:  :||.||.|||.||....:..|||
  Rat   169 -WLWGGCGDNVEYGYRFAKEFVDAREREKNFAKGSEEQGRALMNLQNNEAGRRAVYKMADVSCKC 232

  Fly   281 HGMSGSCQLKTCWKSAPDFHIVGKVLKHQFRKAILVDQSNLGNGEPVVVLKRARNKKSNGGSGSG 345
            ||:||||.|||||....:|..||..||                                      
  Rat   233 HGVSGSCSLKTCWLQLAEFRKVGDRLK-------------------------------------- 259

  Fly   346 STSPDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKNAARMARKLETSLFYYQRSPN 410
                                     .::|.....|.|||...:...:|..:.....|.|...||:
  Rat   260 -------------------------EKYDSAAAMRITRQGKLELTNSRFNQPSPEDLVYVDPSPD 299

  Fly   411 FCERDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQWCCNVECEECH- 474
            :|.|:......||.||.||:.:..:|||..:|||||:.:....:.|||||:|.|||.|.|::|. 
  Rat   300 YCLRNETTGSLGTQGRLCNKTSEGTDGCELMCCGRGYDRFKSVQVERCHCRFHWCCFVRCKKCTE 364

  Fly   475 -VEEWI 479
             |::::
  Rat   365 IVDQYV 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 117/394 (30%)
Wnt5bNP_001093959.1 Wnt 61..372 CDD:393294 126/417 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345784
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48513
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.