DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt10 and Wnt2b

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001178777.1 Gene:Wnt2b / 116466 RGDID:69346 Length:391 Species:Rattus norvegicus


Alignment Length:441 Identity:140/441 - (31%)
Similarity:202/441 - (45%) Gaps:112/441 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TPATSRHCNLHLIVMIILACCTR-----WLYGLPDGRATCRSVPGLTKDQVELCYKASDVTAAAL 101
            :||::|.....|:::::|....|     |..|....|..|.::|||...|.:||.:..|:..:..
  Rat    33 SPASARLGLACLLLLLLLTLPARVDTSWWYIGALGARVICDNIPGLVSRQRQLCQRYPDIMRSVG 97

  Fly   102 EGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHASSLLKKGYRESAFAFAISAAGVAHSVARACSQ 166
            ||....|||||.||:.|||||::|. :.......::|:.. ||:||.:|||:|||.|::.|||||
  Rat    98 EGAREWIRECQHQFRHHRWNCTTLD-RDHTVFGRAMLRSS-REAAFVYAISSAGVVHAITRACSQ 160

  Fly   167 GRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQYLETNQILTPEEEKKYERSKIASR---WKWG 228
            |.|..|.|||                                       |.|.:...:   :.||
  Rat   161 GELSVCSCDP---------------------------------------YTRGRHHDQRGDFDWG 186

  Fly   229 GCSHNMDFGVEYSKLFLDCREK-AGDIQSKINLHNNHAGRIAVSNNMEFRCKCHGMSGSCQLKTC 292
            |||.|:.:||.::|.|:|.:|| ..|.::.:|||||..||.||...::..|||||:||||.|:||
  Rat   187 GCSDNIHYGVRFAKAFVDAKEKRLKDARALMNLHNNRCGRTAVRRFLKLECKCHGVSGSCTLRTC 251

  Fly   293 WKSAPDFHIVGKVLKHQFRKAILVDQSNLGNGEPVVVLKRARNKKSNGGSGSGSTSPDLDSTDAS 357
            |::..||...|..|:.::..|:.|.                            :|....:.|.|.
  Rat   252 WRALSDFRRTGDYLRRRYDGAVQVT----------------------------ATQDGANFTAAR 288

  Fly   358 GGHDDGGTGDSETRRHDELGVERGTRQPSADKNAARMARKLETSLFYYQRSPNFCERDLGADIQG 422
            .|:           ||       .||                |.|.|:..||::|..|..|...|
  Rat   289 QGY-----------RH-------ATR----------------TDLVYFDNSPDYCVLDKAAGSLG 319

  Fly   423 TVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQWCCNVECEEC 473
            |.||.|::.:..:|||..:|||||:......|..:|.|||.|||.|.|:||
  Rat   320 TAGRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCECKFHWCCAVRCKEC 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 122/387 (32%)
Wnt2bNP_001178777.1 wnt 78..380 CDD:278536 128/396 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345757
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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