DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt10 and chmp4c

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_002936670.1 Gene:chmp4c / 100495807 XenbaseID:XB-GENE-954321 Length:222 Species:Xenopus tropicalis


Alignment Length:124 Identity:27/124 - (21%)
Similarity:43/124 - (34%) Gaps:51/124 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 KSNGGSGSGSTS---PD-------LDSTDASGGHDDGGTGDSETRRHDEL----------GVERG 381
            ||:|||||.|.:   |.       |..|:           :..|::.:.|          ..:.|
 Frog     9 KSSGGSGSSSKNRKGPSAQEALFKLRETE-----------EMLTKKQEYLEKKIELELATAKKHG 62

  Fly   382 TRQPSADKNAARMARKLETSLFYYQRSPNFCERDLGADIQGTVG-----RKCNRNTTTS 435
            |:...|...|.:..:|:|..|               |.|.||:.     |:...|:.|:
 Frog    63 TKNKRAALQALKRKKKMEKQL---------------AQIDGTLSTIEFQREALENSHTN 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 27/124 (22%)
chmp4cXP_002936670.1 Snf7 28..196 CDD:367460 18/105 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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