DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt10 and wnt10a

DIOPT Version :9

Sequence 1:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_002934004.2 Gene:wnt10a / 100485724 XenbaseID:XB-GENE-478246 Length:389 Species:Xenopus tropicalis


Alignment Length:442 Identity:167/442 - (37%)
Similarity:245/442 - (55%) Gaps:82/442 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IVMIILACCTRWLYGLP-------DGRATCRSVPGLTKDQVELCYKASDVTAAALEGLDMAIREC 111
            ::::|....|..:.||.       :....|.:|||||:.|:|:|.:..||.|:|::|:.:||.||
 Frog    16 LLLVIRRSLTNEILGLKIPPEPVLNANTVCLTVPGLTRRQMEVCMRHPDVAASAIQGIQIAIHEC 80

  Fly   112 QIQFQWHRWNCSSLSTKSRNPHASSLLKKGYRESAFAFAISAAGVAHSVARACSQGRLMSCGCDP 176
            |.|||.||||||||.||::.|:.|::..:|:||||||:||:||||.|:|:.|||.|:|.|||||.
 Frog    81 QYQFQDHRWNCSSLETKNKIPYDSAVFSRGFRESAFAYAIAAAGVVHAVSNACSMGKLKSCGCDE 145

  Fly   177 TIN------RKTLNKNLRQSLDKEKKQFLQYLETNQILTPEEEKKYERSKIASRWKWGGCSHNMD 235
            ...      |..|::...:::::.|......:|......|..:         ..|:|||||.:::
 Frog   146 KRRGDEEAFRVKLHRLQLEAMNRGKGMVHGVMEHLPADPPGPQ---------DSWEWGGCSPDVE 201

  Fly   236 FGVEYSKLFLDCREKAGDIQSKINLHNNHAGRIAVSNNMEFRCKCHGMSGSCQLKTCWKSAPDFH 300
            :|..:||.|||.||...||.:::.||||..||..|::||:.:|||||.||||||||||:..|:|.
 Frog   202 YGERFSKEFLDSRELFRDIHARMRLHNNRVGRQVVTDNMKRKCKCHGTSGSCQLKTCWQVTPEFR 266

  Fly   301 IVGKVLKHQFRKAILVDQSNLGNGEPVVVLKRARNKKSNGGSGSGSTSPDLDSTDASGGHDDGGT 365
            ::|.:||.:|..|.|:...|...|:    |::|                                
 Frog   267 VIGSLLKDRFYGATLIKPHNRNTGQ----LEQA-------------------------------- 295

  Fly   366 GDSETRRHDELGVERGTRQPSADKNAARMARKLETSLFYYQRSPNFCERDLGADIQGTVGRKCNR 430
                               |:..:..|.:     ..|.|:::||:|||::|..|..||.||.||:
 Frog   296 -------------------PAPFRRRASI-----NDLVYFEKSPDFCEQELNTDSAGTQGRICNK 336

  Fly   431 NTTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQWCCNVECEECHVEEWISIC 482
            .:...|.|.||||||||:.:.|.|:|||:|||.|||.|.||||.:.||:|:|
 Frog   337 TSPGLDNCESLCCGRGHNILRQTRSERCNCKFHWCCYVVCEECRITEWVSVC 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt10NP_609109.3 wnt 82..466 CDD:278536 148/389 (38%)
wnt10aXP_002934004.2 Wnt_Wnt10a 42..389 CDD:381729 163/416 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 352 1.000 Domainoid score I999
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 357 1.000 Inparanoid score I2178
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1241694at2759
OrthoFinder 1 1.000 - - FOG0004126
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2869
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.