DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt6 and Wnt4

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_445854.1 Gene:Wnt4 / 84426 RGDID:621348 Length:351 Species:Rattus norvegicus


Alignment Length:390 Identity:130/390 - (33%)
Similarity:194/390 - (49%) Gaps:87/390 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 CKKTRRLRGKLAEICRHDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRK--SMRKILMRDS 97
            |:|.:.|..:..::|:.:..:: :.:.:|..|...||::|||||||||:.|..  ...|::.:.:
  Rat    43 CEKLKGLIQRQVQMCKRNLEVM-DSVRHGAQLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQGT 106

  Fly    98 RETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAML 162
            ||..||.||::|||.:|||:||:.|.|.:|.||:                               
  Rat   107 REAAFVYAISSAGVAFAVTRACSSGDLEKCGCDR------------------------------- 140

  Fly   163 RQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGC 227
                                  |:..::                           |:| ::|.||
  Rat   141 ----------------------TVHGVS---------------------------PQG-FQWSGC 155

  Fly   228 SDNVNFGLRHSRVFLDAKQRQR-RSDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTC 291
            |||:.:|:..|:.|:|.::|.: .|....|:..|||.|||.||...||:||||||:||||.||||
  Rat   156 SDNIAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAILTHMRVECKCHGVSGSCEVKTC 220

  Fly   292 WLKMPPFREVAGRLRDRYDSARKVTLRNDGNS--FMPESPHARPANKYQLVFADDSPDFCTPNSK 354
            |..:||||:|...|::::|.|.:|..|..|:|  .:|.:...:|.....||:.:.|||||..:.:
  Rat   221 WRAVPPFRQVGHALKEKFDGATEVEPRRVGSSRALVPRNAQFKPHTDEDLVYLEPSPDFCEQDMR 285

  Fly   355 TGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKCLEHRAVNTC 419
            :|.|||:||.||.||...|.|:.|||.||.....||....|.|.|.|||.|.|.:|.....::||
  Rat   286 SGVLGTRGRTCNKTSKAIDGCELLCCGRGFHTAHVELAERCGCRFHWCCFVKCRQCQRLVEMHTC 350

  Fly   420  419
              Rat   351  350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 126/382 (33%)
Wnt4NP_445854.1 wnt 49..351 CDD:278536 128/384 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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