DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt6 and Wnt5a

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_006252726.1 Gene:Wnt5a / 64566 RGDID:69250 Length:391 Species:Rattus norvegicus


Alignment Length:412 Identity:127/412 - (30%)
Similarity:187/412 - (45%) Gaps:106/412 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WAEGTN--------ILLDPNLMCKKTRRLRGKLAEICR----HDSALLKEIIINGINLGFRECEF 73
            |:.|.|        .::....:|.:...|.....::|.    |     .:.|..|...|.:||::
  Rat    58 WSLGMNNPVQMSEVYIIGAQPLCSQLAGLSQGQKKLCHLYQDH-----MQYIGEGAKTGIKECQY 117

  Fly    74 QFRNRRWNCTVLRKS--MRKILMRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRR 136
            |||:|||||:.:..:  ..:::...||||.|..|::||||..|:::||..|:|..|.|.:|    
  Rat   118 QFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRACREGELSTCGCSRA---- 178

  Fly   137 NGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRR 201
                                                                           .|
  Rat   179 ---------------------------------------------------------------AR 180

  Fly   202 PGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGT------LVKFH 260
            |             |.....|.||||.||:::|.|.::.|:||::|:|....|:      |:..|
  Rat   181 P-------------KDLPRDWLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYESARILMNLH 232

  Fly   261 NNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNSFM 325
            ||.|||..:.:...:.|||||:||||::|||||::..||:|...|:::||||..:.|.:.|....
  Rat   233 NNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAMRLNSRGKLVQ 297

  Fly   326 PESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVE 390
            ..|....|..: .||:.|.|||:|..|..||:||||||.||.||.|.|.|:.:||.||:.:....
  Rat   298 VNSRFNSPTTQ-DLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTV 361

  Fly   391 EQTNCKCVFKWCCEVTCEKCLE 412
            :...|.|.|.|||.|.|:||.|
  Rat   362 QTERCHCKFHWCCYVKCKKCTE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 123/384 (32%)
Wnt5aXP_006252726.1 Wnt_Wnt5a 80..391 CDD:381721 124/390 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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