DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and wnt3

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001108024.1 Gene:wnt3 / 569420 ZFINID:ZDB-GENE-081003-1 Length:355 Species:Danio rerio


Alignment Length:397 Identity:134/397 - (33%)
Similarity:190/397 - (47%) Gaps:95/397 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LMCKKTRRLRGKLAEICRHDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKSMR---KILM 94
            ::|.....|..|....||:...::.. :..|:.||.:||:.|||.||||||.::.|:.   .:|.
Zfish    43 ILCGSIPGLVPKQLRFCRNYIEIMPS-VAEGVKLGIQECQHQFRGRRWNCTTIKDSLAIFGPVLD 106

  Fly    95 RDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQA 159
            :.:||:.||:||.:|||.:|||::|..|....|.||..|                          
Zfish   107 KATRESAFVHAIASAGVAFAVTRSCAEGTSTMCGCDSHH-------------------------- 145

  Fly   160 AMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQ-WE 223
                                                                    |.|.|: |:
Zfish   146 --------------------------------------------------------KGPPGEGWK 154

  Fly   224 WGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTV 288
            |||||::..||:..||.|.||  |:.|.|..:.:..|||.|||:.|.:.|.|.||||||||||.|
Zfish   155 WGGCSEDAEFGVLVSREFADA--RENRPDARSAMNRHNNEAGRMTILENMHLRCKCHGLSGSCEV 217

  Fly   289 KTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNS-FMPESPHARPA-----NKYQLVFADDSPD 347
            ||||...|.||.:...|:|:||||.::.:.....| ...|:..|:.|     .:..||:.:.||:
Zfish   218 KTCWWAQPDFRLLGDYLKDKYDSASEMVVEKHRESRGWVETLRAKYAFFKHPTERDLVYYEGSPN 282

  Fly   348 FCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKCLE 412
            ||.||.:||:.||:.|.|||:|.|.:.||.|||.|||..|..:.:..|.|:|.|||.|:|::|:.
Zfish   283 FCEPNPETGSFGTRDRACNVSSHGIEGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVSCQECVR 347

  Fly   413 HRAVNTC 419
            ...|:||
Zfish   348 VYDVHTC 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 131/387 (34%)
wnt3NP_001108024.1 WNT1 47..355 CDD:128408 133/393 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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