DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and wnt5a

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001073303.1 Gene:wnt5a / 568191 ZFINID:ZDB-GENE-060328-3 Length:374 Species:Danio rerio


Alignment Length:430 Identity:134/430 - (31%)
Similarity:195/430 - (45%) Gaps:108/430 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLMVIAILIFAM---PMTGFGWAEGTNILLDPNL-------MCKKTRRLRGKLAEICR----HDS 53
            |.::|...:|.|   ......|:...|.||.|.:       :|.:...|.....::|:    |  
Zfish    21 LSIIITFCVFFMLEIVDANSWWSLAMNPLLIPEVYVIGGQPLCSQLSGLSKGQKKLCQLYQDH-- 83

  Fly    54 ALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKS--MRKILMRDSRETGFVNAITAAGVTYAVT 116
               .:.|..|...|.|||:.|||:|||||:.:..|  :.:::...|||:.|..||:||||.:||:
Zfish    84 ---MQYIGEGAKTGIRECQHQFRHRRWNCSTVDNSTVLGRVMHIGSRESAFAFAISAAGVLHAVS 145

  Fly   117 KACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMN 181
            :||..|.|..|.|.:|                                                 
Zfish   146 RACREGALSSCGCSRA------------------------------------------------- 161

  Fly   182 NASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQ 246
                              .||             |.....|.||||.||:|:|.|.||.|:||::
Zfish   162 ------------------SRP-------------KDLPRDWLWGGCGDNLNYGYRFSREFVDARE 195

  Fly   247 RQRRSDLGT------LVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRL 305
            |::....|:      ::..|||.|||..:.|...:.|||||:||||::|||||::..||:|...|
Zfish   196 REKTFSKGSAESARQMMNLHNNEAGRRIVSDLADVSCKCHGVSGSCSLKTCWLQLADFRKVGDVL 260

  Fly   306 RDRYDSARKVTLRNDGNSFMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSS 370
            :::||||..:.:...|......|..:.|:.: .|::...|||:|..||.:|:||||||.||.||.
Zfish   261 KEKYDSAAAMRMNGRGKLVQMHSKFSPPSGQ-DLLYLQPSPDYCIRNSSSGSLGTQGRLCNKTSE 324

  Fly   371 GSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKC 410
            |.|.|..:||.||:.:...|....|.|.|.|||.|.|::|
Zfish   325 GMDGCALMCCGRGYDQYKAELVERCHCKFHWCCYVRCKRC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 124/382 (32%)
wnt5aNP_001073303.1 wnt 69..374 CDD:278536 124/382 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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