DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and Wnt16

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001102693.1 Gene:Wnt16 / 500047 RGDID:1562253 Length:364 Species:Rattus norvegicus


Alignment Length:399 Identity:127/399 - (31%)
Similarity:178/399 - (44%) Gaps:107/399 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LRGKLAEICRHDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKSMRKI---------LMRD 96
            |..:..|:|:....||.. |..|..||.:||..|||:.||||.|...:..::         |...
  Rat    52 LNSRQKELCKRKPYLLPS-IREGARLGIQECRSQFRHERWNCMVATATSTQLATAPLFGYELSSG 115

  Fly    97 SRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAM 161
            ::||.|:.||.|||:.::||::|:.|.:.|||||..                             
  Rat   116 TKETAFIYAIMAAGLVHSVTRSCSAGNMTECSCDTT----------------------------- 151

  Fly   162 LRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGG 226
                           |....:||                                  || |.|||
  Rat   152 ---------------LQNSGSAS----------------------------------EG-WHWGG 166

  Fly   227 CSDNVNFGLRHSRVFLDAKQR---QRRSDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTV 288
            |||:|.:|:..||.|||...|   ::.|.:...:..|||.|||.|:...|.::|:|||:||||.|
  Rat   167 CSDDVQYGMWFSRKFLDLPVRNTTEKESKVLLAMNLHNNEAGRQAVAKLMSVDCRCHGVSGSCAV 231

  Fly   289 KTCWLKMPPFREVAGRLRDRYDSA--------RKVTLRNDGNSFMPESPHARPANKYQLVFADDS 345
            ||||..|..|.::...|:|:|:::        ||:..|.       :.....|..|..|::...|
  Rat   232 KTCWKTMSSFEKIGYFLKDKYENSIQISDKTKRKMRRRE-------KDQRQTPILKDDLLYVHKS 289

  Fly   346 PDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKC 410
            |::|..|.|.|..||||||||.||.|:|.|:.|||.||:...:|.....|:|.|.|||.|.|.:|
  Rat   290 PNYCVENKKLGIPGTQGRECNRTSGGADGCNLLCCGRGYNTHVVRHVERCECKFIWCCYVRCRRC 354

  Fly   411 LEHRAVNTC 419
            .....|:||
  Rat   355 ESMTDVHTC 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 125/397 (31%)
Wnt16NP_001102693.1 wnt 52..364 CDD:278536 127/399 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45757
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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