DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and Wnt6

DIOPT Version :10

Sequence 1:NP_609108.3 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001101696.1 Gene:Wnt6 / 316526 RGDID:1304559 Length:365 Species:Rattus norvegicus


Alignment Length:425 Identity:165/425 - (38%)
Similarity:231/425 - (54%) Gaps:79/425 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MVIAILIFAMPMTGFGWAEGTNILLDPNLMCKKTRRLRGKLAEICRHDSALLKEIIINGINLGFR 69
            :::.:|:....:.|..||.|:.:::||..:|:|.|||.|:.||:|:.:..::.| :..|..||.|
  Rat    11 LLLLLLLCPAHVGGLWWAVGSPLVMDPTSICRKARRLAGRQAELCQAEPEVVAE-LARGARLGVR 74

  Fly    70 ECEFQFRNRRWNCTVLRKSMRKILMRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHM 134
            ||:||||.|||||:...|:..::|.:|.|||.||.||||||.::|||:||:||:|::|.|.    
  Rat    75 ECQFQFRFRRWNCSSHSKAFGRVLQQDIRETAFVFAITAAGASHAVTQACSMGELLQCGCQ---- 135

  Fly   135 RRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRN 199
                                                                   ||   ||...
  Rat   136 -------------------------------------------------------AP---RGRAP 142

  Fly   200 RRPGGRRGRRKFWDNIKFPEG---------QWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGT 255
            .||.|..|       ...|.|         .||||||.|:|:||...||:|:||:.::.|.|:..
  Rat   143 PRPSGLLG-------TPGPPGPTGSPDASAAWEWGGCGDDVDFGDEKSRLFMDAQHKRGRGDIRA 200

  Fly   256 LVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTLRND 320
            ||:.|||.|||||:|...|.|||||||||||.::|||.|:||||||..||.:|:..|.:|...||
  Rat   201 LVQLHNNEAGRLAVRSHTRTECKCHGLSGSCALRTCWQKLPPFREVGARLLERFHGASRVMGTND 265

  Fly   321 GNSFMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHT 385
            |.:.:|.....:|..:..|::|.||||||.||.:||:.||:||.||.::.....||.|||.|||.
  Rat   266 GKALLPAVRTLKPPGRADLLYAADSPDFCAPNRRTGSPGTRGRACNSSAPDLSGCDLLCCGRGHR 330

  Fly   386 RRIVEEQTNCKCVFKWCCEVTCEKCLEHRAVNTCL 420
            :..|:.:.||.|.|.|||.|.|.:|...:.::.||
  Rat   331 QESVQLEENCLCRFHWCCVVQCHRCRVRKELSLCL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_609108.3 Wnt_Wnt6 29..420 CDD:381712 158/399 (40%)
Wnt6NP_001101696.1 Wnt_Wnt6 35..365 CDD:381712 133/338 (39%)

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