DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and wnt5b

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_017210434.1 Gene:wnt5b / 30105 ZFINID:ZDB-GENE-980526-87 Length:380 Species:Danio rerio


Alignment Length:435 Identity:131/435 - (30%)
Similarity:199/435 - (45%) Gaps:118/435 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLMVIAILIF---AMPMTGFGWAEGTNILLDPNL-------MCKKTRRLRGKLAEICRHDSALLK 57
            ||:.:.:::.   .:.:....|:...|.:..|.:       :|.:...|.....::|:    |.:
Zfish    27 LLLAVTLIVCNSQLLVVANSWWSLAMNPIQRPEMYIIGAQPLCSQLTGLSQGQRKLCQ----LYQ 87

  Fly    58 EIII---NGINLGFRECEFQFRNRRWNCTVLRKS--MRKILMRDSRETGFVNAITAAGVTYAVTK 117
            :.::   .|...|.:||::|||.|||||:.:..:  ..:::...||||.|..|::||||..||::
Zfish    88 DHMVYIGEGAKTGIKECQYQFRQRRWNCSTVDNTSVFGRVMHIGSRETAFTYAVSAAGVVNAVSR 152

  Fly   118 ACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNN 182
            ||..|:|..|.|.:|...|:                                       |.|   
Zfish   153 ACREGELSTCGCSRAARPRD---------------------------------------LPR--- 175

  Fly   183 ASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQR 247
                                                  .|.||||.||||:|.|.:|.|:||::|
Zfish   176 --------------------------------------DWLWGGCGDNVNYGYRFAREFVDARER 202

  Fly   248 QRRSDLG------TLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLR 306
            ::....|      ||:...||.|||:|:.:...:.|||||:||||::|||||::..||.|...|:
Zfish   203 EKNYPRGSVEHARTLMNLQNNEAGRMAVYNLANVACKCHGVSGSCSLKTCWLQLADFRRVGEFLK 267

  Fly   307 DRYDSARKVTLRNDG------NSFMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGREC 365
            ::||||..:.:...|      |.|.|      |..: .||:.|.|||:|..|..||:||||||.|
Zfish   268 EKYDSAAAMRINRRGKLELVNNRFNP------PTGE-DLVYIDPSPDYCLRNETTGSLGTQGRLC 325

  Fly   366 NVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKC 410
            |.||.|.|.|:.:||.||:.:....:...|.|.|.|||.|.|::|
Zfish   326 NKTSEGMDGCELMCCGRGYDQFKTYKHERCHCKFHWCCYVKCKRC 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 125/387 (32%)
wnt5bXP_017210434.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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