DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and Wnt3

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_017452517.1 Gene:Wnt3 / 24882 RGDID:3972 Length:367 Species:Rattus norvegicus


Alignment Length:333 Identity:118/333 - (35%)
Similarity:158/333 - (47%) Gaps:91/333 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 MRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQ 158
            |..:||:.||:||.:|||.:|||::|..|....|.||..|                         
  Rat   118 MTATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHH------------------------- 157

  Fly   159 AAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQ-W 222
                                                                     |.|.|: |
  Rat   158 ---------------------------------------------------------KGPPGEGW 165

  Fly   223 EWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCT 287
            :|||||::.:||:..||.|.||  |:.|.|..:.:..|||.|||..|.|.|.|:||||||||||.
  Rat   166 KWGGCSEDADFGVLVSREFADA--RENRPDARSAMNKHNNEAGRTTILDHMHLKCKCHGLSGSCE 228

  Fly   288 VKTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNS-FMPESPHA-----RPANKYQLVFADDSP 346
            |||||...|.||.:...|:|:||||.::.:.....| ...|:..|     :|..:..||:.::||
  Rat   229 VKTCWWAQPDFRAIGDFLKDKYDSASEMVVEKHRESRGWVETLRAKYALFKPPTERDLVYYENSP 293

  Fly   347 DFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKCL 411
            :||.||.:||:.||:.|.|||||.|.|.||.|||.|||..|..:.:..|.|||.|||.|:|::|:
  Rat   294 NFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCVFHWCCYVSCQECI 358

  Fly   412 EHRAVNTC 419
            ....|:||
  Rat   359 RIYDVHTC 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 116/331 (35%)
Wnt3XP_017452517.1 Wnt_Wnt3_Wnt3a <119..367 CDD:381709 117/332 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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