DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt6 and Wnt5a

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_006518986.1 Gene:Wnt5a / 22418 MGIID:98958 Length:393 Species:Mus musculus


Alignment Length:412 Identity:127/412 - (30%)
Similarity:187/412 - (45%) Gaps:106/412 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WAEGTN--------ILLDPNLMCKKTRRLRGKLAEICR----HDSALLKEIIINGINLGFRECEF 73
            |:.|.|        .::....:|.:...|.....::|.    |     .:.|..|...|.:||::
Mouse    60 WSLGMNNPVQMSEVYIIGAQPLCSQLAGLSQGQKKLCHLYQDH-----MQYIGEGAKTGIKECQY 119

  Fly    74 QFRNRRWNCTVLRKS--MRKILMRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRR 136
            |||:|||||:.:..:  ..:::...||||.|..|::||||..|:::||..|:|..|.|.:|    
Mouse   120 QFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRACREGELSTCGCSRA---- 180

  Fly   137 NGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRR 201
                                                                           .|
Mouse   181 ---------------------------------------------------------------AR 182

  Fly   202 PGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGT------LVKFH 260
            |             |.....|.||||.||:::|.|.::.|:||::|:|....|:      |:..|
Mouse   183 P-------------KDLPRDWLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYESARILMNLH 234

  Fly   261 NNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNSFM 325
            ||.|||..:.:...:.|||||:||||::|||||::..||:|...|:::||||..:.|.:.|....
Mouse   235 NNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAMRLNSRGKLVQ 299

  Fly   326 PESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVE 390
            ..|....|..: .||:.|.|||:|..|..||:||||||.||.||.|.|.|:.:||.||:.:....
Mouse   300 VNSRFNSPTTQ-DLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTV 363

  Fly   391 EQTNCKCVFKWCCEVTCEKCLE 412
            :...|.|.|.|||.|.|:||.|
Mouse   364 QTERCHCKFHWCCYVKCKKCTE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 123/384 (32%)
Wnt5aXP_006518986.1 Wnt_Wnt5a 82..393 CDD:381721 124/390 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.