DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and Wnt3

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_033547.1 Gene:Wnt3 / 22415 MGIID:98955 Length:355 Species:Mus musculus


Alignment Length:405 Identity:141/405 - (34%)
Similarity:195/405 - (48%) Gaps:96/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TNILLDPNLMCKKTRRLRGKLAEICRHDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKSM 89
            |::...| |:|.....|..|....||:...::.. :..|:.||.:||:.|||.||||||.:..|:
Mouse    36 TSLASQP-LLCGSIPGLVPKQLRFCRNYIEIMPS-VAEGVKLGIQECQHQFRGRRWNCTTIDDSL 98

  Fly    90 R---KILMRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEA 151
            .   .:|.:.:||:.||:||.:|||.:|||::|..|....|.||..|                  
Mouse    99 AIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHH------------------ 145

  Fly   152 ALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIK 216
                                                                            |
Mouse   146 ----------------------------------------------------------------K 146

  Fly   217 FPEGQ-WEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGTLVKFHNNNAGRLAIRDAMRLECKCH 280
            .|.|: |:|||||::.:||:..||.|.||  |:.|.|..:.:..|||.|||..|.|.|.|:||||
Mouse   147 GPPGEGWKWGGCSEDADFGVLVSREFADA--RENRPDARSAMNKHNNEAGRTTILDHMHLKCKCH 209

  Fly   281 GLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNS-FMPESPHA-----RPANKYQL 339
            ||||||.|||||...|.||.:...|:|:||||.::.:.....| ...|:..|     :|..:..|
Mouse   210 GLSGSCEVKTCWWAQPDFRAIGDFLKDKYDSASEMVVEKHRESRGWVETLRAKYALFKPPTERDL 274

  Fly   340 VFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCE 404
            |:.::||:||.||.:||:.||:.|.|||||.|.|.||.|||.|||..|..:.:..|.|||.|||.
Mouse   275 VYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCVFHWCCY 339

  Fly   405 VTCEKCLEHRAVNTC 419
            |:|::|:....|:||
Mouse   340 VSCQECIRIYDVHTC 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 135/387 (35%)
Wnt3NP_033547.1 Wnt_Wnt3_Wnt3a 42..355 CDD:381709 140/399 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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