DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt6 and mom-2

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_505154.1 Gene:mom-2 / 179217 WormBaseID:WBGene00003395 Length:362 Species:Caenorhabditis elegans


Alignment Length:444 Identity:131/444 - (29%)
Similarity:190/444 - (42%) Gaps:115/444 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLMVIAILIFAMPMTGFGW-------AEGTNILLDPNLMCKKTRRLRGKLAEICRHDSALLKEII 60
            ||.:|..|:|| |.:...|       ....|....| ::||....|..:...:| |::..:.:.:
 Worm     8 LLAIIYFLVFA-PKSADAWWLLSKTDTSSANSGSSP-ILCKNVPGLTPQQKRMC-HENPNIIKYL 69

  Fly    61 INGINLGFRECEFQFRNRRWNCTVLRKSM-RKILMRDSRETGFVNAITAAGVTYAVTKACTMGQL 124
            |:|:......||:.|:...||||:....: ...|...|||:.:|.||:||||::::.:||:.|.:
 Worm    70 ISGLRSALHTCEYTFQREAWNCTLTLPGVGTSPLQIASRESAYVYAISAAGVSHSLARACSKGLI 134

  Fly   125 VECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDI 189
            .:|.|        |..||    .:...|:                    ||..||.::       
 Worm   135 DDCGC--------GETPQ----GSGSVAV--------------------SQASSRSSS------- 160

  Fly   190 APVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLG 254
                                           .:.|.||||||.||....|.|:|...||..::..
 Worm   161 -------------------------------DFVWAGCSDNVKFGNTFGRKFVDQYDRQHATEPR 194

  Fly   255 TLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTLRN 319
            :.:..|||..||..:.:||..||||||:||||..||||..||.|.|.|.||..:|..|:.|| .|
 Worm   195 SQMNLHNNRVGRRLLVNAMNKECKCHGVSGSCVTKTCWKVMPKFDEFASRLHQKYQLAKLVT-NN 258

  Fly   320 DGNSFMPESPHARPAN----------------KYQLVFADDSPDFCTPNSKTGALGTQGRECNVT 368
            |....:..||.|..:.                :.:|::.|.||::|       |:..:.|||   
 Worm   259 DQKLTVRSSPSAGSSGRSERFARNMDASSKQMRNELIYLDASPNYC-------AIDVKDREC--- 313

  Fly   369 SSGSDRCDRLCCNRG--HTRRIVEEQTNCKCVFKWCCEVTCEKCLEHRAVNTCL 420
               .:.|..:||.||  .||.||:|.  |.|.|.|||||.|:.|.:....|.||
 Worm   314 ---GENCPNICCGRGWRTTREIVDEP--CHCQFVWCCEVKCKTCKKLVERNYCL 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 117/396 (30%)
mom-2NP_505154.1 wnt 51..361 CDD:278536 117/396 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45757
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.