DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and lin-44

DIOPT Version :10

Sequence 1:NP_609108.3 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001021081.1 Gene:lin-44 / 171994 WormBaseID:WBGene00003029 Length:348 Species:Caenorhabditis elegans


Alignment Length:414 Identity:104/414 - (25%)
Similarity:158/414 - (38%) Gaps:146/414 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PNLM---CKK----TRRLRG-KLAEICR-HDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLR 86
            ||::   |..    :|.||. :||  || |.:.::.  ...|:..|.:.|..:.|.::|:|:...
 Worm    46 PNILKQGCPSDLLHSRALRSIQLA--CRTHPATVIS--AFEGVQEGLQNCANRLRFQQWDCSEAG 106

  Fly    87 KSMR--KILMRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATA 149
            ..|.  .:|.:..||:..:.|:::|...:.|..||..|.:.:|:|:                   
 Worm   107 NIMHDPPLLRQGFRESSLIWALSSASAAWGVATACAQGWIDDCACN------------------- 152

  Fly   150 EAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDN 214
                          .||                              |:|               
 Worm   153 --------------NQM------------------------------GQN--------------- 158

  Fly   215 IKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGTL---VKFHNNNAGRLAIRDAMRLE 276
                  ::|:|||:..|..|:..||..|     .:...:.||   |:.||..||||||:..:...
 Worm   159 ------EYEFGGCTHGVQHGITASRKLL-----TKVGAVNTLLRKVEKHNLKAGRLAIKKTLISS 212

  Fly   277 CKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRY--------DSARKVTLRNDGNSFMPESPHARP 333
            |||||:||||..||||.:......:...|.::|        ||..|.|                 
 Worm   213 CKCHGVSGSCQQKTCWKRTATLEHITDYLVEKYARAKLYTDDSVVKTT----------------- 260

  Fly   334 ANKYQLVFADDSPDFCTPNSKTGALGTQGREC---NVTSSGSDRCDRLCCNRGHTRRIVEEQTNC 395
                .|::.:.|||.|...|      ..||.|   |.|.:..| ||||||..|.:.|....:..|
 Worm   261 ----DLIYLEASPDVCKAKS------VAGRVCAWRNETHTQGD-CDRLCCGNGFSIRHEVVRVKC 314

  Fly   396 KCVFKWCCEVTCEKCLEHRAVNTC 419
            .|.|.|||.:.|:.|::||.::||
 Worm   315 DCEFVWCCNLVCKDCIQHRWISTC 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_609108.3 Wnt_Wnt6 29..420 CDD:381712 104/414 (25%)
lin-44NP_001021081.1 WNT1 64..339 CDD:128408 99/396 (25%)

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