DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and Wnt11

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_536326.1 Gene:Wnt11 / 140584 RGDID:621463 Length:354 Species:Rattus norvegicus


Alignment Length:423 Identity:129/423 - (30%)
Similarity:192/423 - (45%) Gaps:103/423 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VIAILIFAMPM-----TGFGWAEGTN----ILLDPNLMCKKTRRLRGKLAEICRHDSALLKEIII 61
            |...|:||:.:     .|..|...:.    :.|:....||:...|.....::||.:..|:: .|:
  Rat     7 VCEALLFALALHTGVCYGIKWLALSKTPAALALNQTQHCKQLEGLVSAQVQLCRSNLELMR-TIV 70

  Fly    62 NGINLGFRECEFQFRNRRWNCTVLRKSMRKI--LMRDSRETGFVNAITAAGVTYAVTKACTMGQL 124
            :......:.|...|.:.||||:.:..:...:  |.|.:||:.||.|::||.:::.:.:|||.|.|
  Rat    71 HAAREAMKACRRAFADMRWNCSSIELAPNYLLDLERGTRESAFVYALSAATISHTIARACTSGDL 135

  Fly   125 VECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDI 189
            ..|||.                                    |:..:.|.               
  Rat   136 PGCSCG------------------------------------PVPGEPPG--------------- 149

  Fly   190 APVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDA--KQRQRRSD 252
                        ||.|                  ||||:||:::||.....|.||  |.::..|.
  Rat   150 ------------PGNR------------------WGGCADNLSYGLLMGAKFSDAPMKVKKTGSQ 184

  Fly   253 LGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTL 317
            ...|::.||:..||.|:|.::..:|||||:||||:::|||..:...|:||..|:.||.||.||..
  Rat   185 ANKLMRLHNSEVGRQALRASLETKCKCHGVSGSCSIRTCWKGLQELRDVAADLKTRYLSATKVVH 249

  Fly   318 RNDG--NSFMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCC 380
            |..|  ...:|:....||....:||:...|||||..|.|.|:.|||.|:||.||:|||.||.:||
  Rat   250 RPMGTRKHLVPKDLDIRPVKDSELVYLQSSPDFCMKNEKVGSHGTQDRQCNKTSNGSDSCDLMCC 314

  Fly   381 NRG---HTRRIVEEQTNCKCVFKWCCEVTCEKC 410
            .||   :|.|:||   .|.|.:.|||.|||.:|
  Rat   315 GRGYNPYTDRVVE---RCHCKYHWCCYVTCRRC 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 120/379 (32%)
Wnt11NP_536326.1 Wnt_Wnt11 51..354 CDD:381717 120/379 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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