DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and Wnt2b

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001178777.1 Gene:Wnt2b / 116466 RGDID:69346 Length:391 Species:Rattus norvegicus


Alignment Length:427 Identity:141/427 - (33%)
Similarity:206/427 - (48%) Gaps:98/427 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLMVIAILIFAMP-MTGFGW----AEGTNILLD--PNLMCKKTRRLRGKLAEICRHDSALLKEII 60
            |..::.:|:..:| .....|    |.|..::.|  |.|:.:: |:|..:..:|.|.        :
  Rat    41 LACLLLLLLLTLPARVDTSWWYIGALGARVICDNIPGLVSRQ-RQLCQRYPDIMRS--------V 96

  Fly    61 INGINLGFRECEFQFRNRRWNCTVLRKS---MRKILMRDSRETGFVNAITAAGVTYAVTKACTMG 122
            ..|.....|||:.|||:.|||||.|.:.   ..:.::|.|||..||.||::|||.:|:|:||:.|
  Rat    97 GEGAREWIRECQHQFRHHRWNCTTLDRDHTVFGRAMLRSSREAAFVYAISSAGVVHAITRACSQG 161

  Fly   123 QLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMT 187
            :|..||||..                                   .:.:|..||           
  Rat   162 ELSVCSCDPY-----------------------------------TRGRHHDQR----------- 180

  Fly   188 DIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSD 252
                                            |.::|||||||:::|:|.::.|:|||:: |..|
  Rat   181 --------------------------------GDFDWGGCSDNIHYGVRFAKAFVDAKEK-RLKD 212

  Fly   253 LGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTL 317
            ...|:..|||..||.|:|..::|||||||:|||||::|||..:..||.....||.|||.|.:||.
  Rat   213 ARALMNLHNNRCGRTAVRRFLKLECKCHGVSGSCTLRTCWRALSDFRRTGDYLRRRYDGAVQVTA 277

  Fly   318 RNDGNSFMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNR 382
            ..||.:|.......|.|.:..||:.|:|||:|..:...|:|||.||.|:.||.|:|.|:.:||.|
  Rat   278 TQDGANFTAARQGYRHATRTDLVYFDNSPDYCVLDKAAGSLGTAGRVCSKTSKGTDGCEIMCCGR 342

  Fly   383 GHTRRIVEEQTNCKCVFKWCCEVTCEKCLEHRAVNTC 419
            |:....|...|.|:|.|.|||.|.|::|.....|:||
  Rat   343 GYDTTRVTRVTQCECKFHWCCAVRCKECRNTVDVHTC 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 129/380 (34%)
Wnt2bNP_001178777.1 wnt 78..380 CDD:278536 133/390 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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