DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and wnt4

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001239015.1 Gene:wnt4 / 100491282 XenbaseID:XB-GENE-484098 Length:351 Species:Xenopus tropicalis


Alignment Length:436 Identity:136/436 - (31%)
Similarity:210/436 - (48%) Gaps:109/436 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLLMVIAILIFAMPMTGFGWAEGTNIL----------LDPNLMCKKTRRLRGKLAEICRHDSAL 55
            :|.|:::.:.:|:        |..:|.|          :.....|:|.:.|..:..::|:.:..:
 Frog     7 LRSLLMMILAVFS--------ANASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEV 63

  Fly    56 LKEIIINGINLGFRECEFQFRNRRWNCTVLRK--SMRKILMRDSRETGFVNAITAAGVTYAVTKA 118
            : :.:..|..|...||::|||||||||:.|..  ...|::.:.:||..||.||::|||.:| |:|
 Frog    64 M-DSVRRGAQLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQGTREAAFVYAISSAGVAFAXTRA 127

  Fly   119 CTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNA 183
            |:.|.|.:|.||:                                                    
 Frog   128 CSSGDLEKCGCDR---------------------------------------------------- 140

  Fly   184 STMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQ 248
             |:..::                           |:| ::|.|||||:.:|:..|:.|:|.::|.
 Frog   141 -TVHGVS---------------------------PQG-FQWSGCSDNIAYGVAFSQSFVDVRERS 176

  Fly   249 R-RSDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSA 312
            : .|....|:..|||:|||.||.:.||:||||||:||||.|||||..||.||:|...|::::|.|
 Frog   177 KGGSSSRALMNLHNNDAGRKAILNNMRVECKCHGVSGSCEVKTCWKAMPTFRKVGNVLKEKFDGA 241

  Fly   313 RKVTLRNDGNS--FMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRC 375
            .:|..:..|::  .:|::... |.....||:.|.|||||..:.|.|.|||.||:||.||...|.|
 Frog   242 TEVEQKKIGSTKVLVPKNSQFXPHTDEDLVYLDSSPDFCDHDLKNGVLGTTGRQCNKTSKAIDGC 306

  Fly   376 DRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKCLEHRAV--NTC 419
            :.:||.||.....||....|.|.|.|||.|.|::|  |:.|  :||
 Frog   307 ELMCCGRGFHTEEVEIIERCSCKFHWCCFVKCKQC--HKVVEMHTC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 126/384 (33%)
wnt4NP_001239015.1 WNT1 45..351 CDD:128408 129/390 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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