DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and wnt3a

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_002939354.2 Gene:wnt3a / 100488632 XenbaseID:XB-GENE-1217288 Length:352 Species:Xenopus tropicalis


Alignment Length:399 Identity:133/399 - (33%)
Similarity:190/399 - (47%) Gaps:103/399 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PNLMCKKTRRLRGKLAEICRHDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKSMR---KI 92
            |.|:.|:.|        .||:...::.. :..|:.:|.:||:.|||.||||||.:..::.   .:
 Frog    46 PGLVAKQMR--------FCRNYMEIMPS-VAEGVKIGIQECQHQFRGRRWNCTTVNDNLAIFGPV 101

  Fly    93 LMRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQ 157
            |.:.:||:.||:||.:|||.:|||::|..|....|.||..|                        
 Frog   102 LDKATRESAFVHAIASAGVAFAVTRSCAEGSATICGCDSHH------------------------ 142

  Fly   158 QAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQ- 221
                                                                      |.|.|: 
 Frog   143 ----------------------------------------------------------KGPPGEG 149

  Fly   222 WEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSC 286
            |:|||||::::||...||.|.||  |:.|.|..:.:..|||.|||.:|.|...|:||||||||||
 Frog   150 WKWGGCSEDMDFGSMVSREFADA--RENRPDARSAMNRHNNEAGRTSILDHRHLKCKCHGLSGSC 212

  Fly   287 TVKTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNS------FMPESPHARPANKYQLVFADDS 345
            .|||||...|.||.:...|:|:||||.::.:.....|      ..|:....:|..:..|::.:.|
 Frog   213 EVKTCWWSQPDFRVIGDYLKDKYDSASEMVVEKHRESRGWVETLRPKYTFFKPPTERDLIYYESS 277

  Fly   346 PDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKC 410
            |:||.||.:||:.||:.|.|||||.|.|.||.|||.|||..|..:.:..|.|:|.|||.|:|::|
 Frog   278 PNFCEPNPETGSFGTRDRVCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVSCQEC 342

  Fly   411 LEHRAVNTC 419
            :....|:||
 Frog   343 IRVYDVHTC 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 127/387 (33%)
wnt3aXP_002939354.2 Wnt_Wnt3_Wnt3a 39..352 CDD:381709 133/399 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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