DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and LOC100487954

DIOPT Version :9

Sequence 1:NP_001260188.1 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_002938545.1 Gene:LOC100487954 / 100487954 -ID:- Length:354 Species:Xenopus tropicalis


Alignment Length:441 Identity:147/441 - (33%)
Similarity:203/441 - (46%) Gaps:113/441 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLLMVIAILIFAMPMTGF--GWA----EGTNILLDPNLMCKKTRRLRGKLAEICRHDSALLKEI 59
            :|||..:.|...|..:.|:  .|:    :..:.|....::|.....|..|....||:...::.. 
 Frog     4 LRLLHFLWIFSAAPVLAGYPIWWSLALGQQYSTLGSQPILCGSIPGLVPKQMRFCRNYIEIMPS- 67

  Fly    60 IINGINLGFRECEFQFRNRRWNCTVLRKSMR---KILMRDSRETGFVNAITAAGVTYAVTKACTM 121
            :..||.||.:||:.|||.||||||.:..|:.   .:|.:.:||:.||:||.:|||.:|||.:|..
 Frog    68 VAEGIKLGIQECQHQFRGRRWNCTTIHDSLAIFGPVLDKATRESAFVHAIASAGVAFAVTHSCAE 132

  Fly   122 GQLVECSCDKAHMRRNGGQPQMVTAATAEAALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTM 186
            |....|.||.                                                       
 Frog   133 GSSTICGCDS------------------------------------------------------- 142

  Fly   187 TDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRS 251
                  .|:|.                    |...|:|||||::.:||:..||.|.||  ::.|.
 Frog   143 ------HHKGS--------------------PGDGWKWGGCSEDADFGVLVSREFADA--QENRP 179

  Fly   252 DLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKV- 315
            |..:.:..|||.|||..|.|.|.|.||||||||||.|||||...|.||.:...|:|:||||.:: 
 Frog   180 DARSAINRHNNEAGRATILDHMHLRCKCHGLSGSCEVKTCWWSQPDFRAIGDHLKDKYDSASEMS 244

  Fly   316 ------------TLRNDGNSFMPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVT 368
                        |||...:.|       :|..:..||:.:.||:||.||.:||:.|||||.||||
 Frog   245 VEKHRESRGWVETLRAKYSLF-------KPPTERDLVYYETSPNFCEPNPETGSFGTQGRSCNVT 302

  Fly   369 SSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFKWCCEVTCEKCLEHRAVNTC 419
            |.|.|.||.|||.|||..|..:.:..|.|:|.|||.|:|::|:....|:||
 Frog   303 SHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVSCQECVRIYDVHTC 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_001260188.1 wnt 41..419 CDD:278536 136/393 (35%)
LOC100487954XP_002938545.1 WNT1 46..354 CDD:128408 138/399 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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