DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and Wnt4

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_445854.1 Gene:Wnt4 / 84426 RGDID:621348 Length:351 Species:Rattus norvegicus


Alignment Length:435 Identity:165/435 - (37%)
Similarity:218/435 - (50%) Gaps:110/435 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SMWWGIAKVGEPNNITPIMYMDPAIHSTLRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNR 100
            |.|..:||:....:|:.....:..  ..|.::|.::.:.|..|:.::..||.|||.|||:|||||
  Rat    23 SNWLYLAKLSSVGSISEEETCEKL--KGLIQRQVQMCKRNLEVMDSVRHGAQLAIEECQYQFRNR 85

  Fly   101 RWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSP 165
            ||||||.:   ...:|||:|.:|.||.:|:|||:||.|..::.||||.|.:|.|.||.:....||
  Rat    86 RWNCSTLD---SLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGDLEKCGCDRTVHGVSP 147

  Fly   166 QANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFVDTGERGR---NLREKMNLHNNEAGRAHVQA 227
            |.            ::|.||||||.:|..||:.|||..||.:   :.|..||||||||||..:..
  Rat   148 QG------------FQWSGCSDNIAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAILT 200

  Fly   228 EMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAG 292
            .||.||||||:||||.|||||..:..||.:|..||.:|||||.|:               |...|
  Rat   201 HMRVECKCHGVSGSCEVKTCWRAVPPFRQVGHALKEKFDGATEVE---------------PRRVG 250

  Fly   293 SNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRN 357
            |    |..|:                                                       
  Rat   251 S----SRALV------------------------------------------------------- 256

  Fly   358 GRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDG 422
                            |.|.:.||...:|||||||||.|||:::|.|:|||.||.||:||..:||
  Rat   257 ----------------PRNAQFKPHTDEDLVYLEPSPDFCEQDMRSGVLGTRGRTCNKTSKAIDG 305

  Fly   423 CGLMCCGRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTC 467
            |.|:|||||:....|.:.|||.|.|||||.|||:.|:....::||
  Rat   306 CELLCCGRGFHTAHVELAERCGCRFHWCCFVKCRQCQRLVEMHTC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 160/407 (39%)
Wnt4NP_445854.1 wnt 49..351 CDD:278536 160/407 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44605
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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