DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and wnt10b

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001072771.1 Gene:wnt10b / 780228 XenbaseID:XB-GENE-482664 Length:388 Species:Xenopus tropicalis


Alignment Length:441 Identity:138/441 - (31%)
Similarity:190/441 - (43%) Gaps:142/441 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNRRWNCSTRNFSRGKNLFGK------IVDR 122
            |.::|..|...||.|..:.::|..:||.|||||.:.:||||||      ....||      |:.|
 Frog    52 LSKRQMGLCVRNPDVTASALQGIQIAIHECQHQLKGQRWNCST------LETMGKMPHDSAILKR 110

  Fly   123 GCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSHQS-------RSPQANHQA-GSVAGV-R 178
            |.||::|.:::.:|.|.||:|.|||.|.::.|.|::..:.       :..|...|| ..|.|: |
 Frog   111 GFRESAFAFSLLAAGVMHSVATACSLGKLQGCGCEWKRRGTEEKIRLKLNQLQLQALSKVKGLPR 175

  Fly   179 D----------------WEWGGCSDNIGFGFKFSREFVDTGERGRNLREKMNLHNNEAGRAHVQA 227
            |                ||||||...:.||.||||:|:|:.|..|::..:|.:|||..||..|..
 Frog   176 DLTPLLRETPEPSPQDTWEWGGCKHELEFGEKFSRDFLDSRESPRDIHARMRIHNNRVGRQAVTE 240

  Fly   228 EMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAG 292
            .|::.|||||.||||..||||....:||.:|..::.:...|..|                 |:..
 Frog   241 NMKRRCKCHGTSGSCQFKTCWHVTPDFRAVGTLMRDKLQRAVFV-----------------NSRN 288

  Fly   293 SNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRN 357
            .||                                                              
 Frog   289 KNS-------------------------------------------------------------- 291

  Fly   358 GRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDG 422
                    ..:|.:||      |...:|:|||.|.||.||||:.|....||.||.||:||..:|.
 Frog   292 --------GAFHPRLN------KKRLAKELVYFEKSPDFCEKDPRVDSPGTQGRVCNKTSQQMDN 342

  Fly   423 CGLMCCGRGY------RRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTC 467
            |..:|||||:      ||      |||.|.|||||.|.|:.||..:::..|
 Frog   343 CASLCCGRGHNILMQTRR------ERCNCRFHWCCYVMCEECRVTQLVNVC 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 138/441 (31%)
wnt10bNP_001072771.1 wnt 52..388 CDD:278536 138/441 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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