DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and Wnt5a

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_006252726.1 Gene:Wnt5a / 64566 RGDID:69250 Length:391 Species:Rattus norvegicus


Alignment Length:468 Identity:161/468 - (34%)
Similarity:222/468 - (47%) Gaps:144/468 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LMALCSGGSSLSQVEGKQKSGRGRGSMWWGIAKVGEPNNITPIMYMDPAI------------HST 63
            ||||.: ..|.:||..:..|       ||.:..    ||  |:...:..|            .|.
  Rat    38 LMALAT-FFSFAQVVIEANS-------WWSLGM----NN--PVQMSEVYIIGAQPLCSQLAGLSQ 88

  Fly    64 LRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNRRWNCSTRNFSRGKNLFGKIVDRGCRETS 128
            .::|...|.:|:...:|   :||...|.|||:|||:|||||||.:   ..::||:::..|.|||:
  Rat    89 GQKKLCHLYQDHMQYIG---EGAKTGIKECQYQFRHRRWNCSTVD---NTSVFGRVMQIGSRETA 147

  Fly   129 FIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSPQANHQAGSVAGVRDWEWGGCSDNIGFGF 193
            |.||:::|.|.::::|||.||.:.:|.|     ||:.:.....      |||.||||.|||.:|:
  Rat   148 FTYAVSAAGVVNAMSRACREGELSTCGC-----SRAARPKDLP------RDWLWGGCGDNIDYGY 201

  Fly   194 KFSREFVDTGERGR--------NLREKMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMR 250
            :|::||||..||.|        :.|..||||||||||..|.......|||||:||||::||||::
  Rat   202 RFAKEFVDARERERIHAKGSYESARILMNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQ 266

  Fly   251 LANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGSNSVGSNGLIIPQSGLVYGEEEE 315
            ||:||.:||.||.::|.|..:::                    ||.|                  
  Rat   267 LADFRKVGDALKEKYDSAAAMRL--------------------NSRG------------------ 293

  Fly   316 RMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRNGRRQGRKHNRYHFQLNPHNPEHK 380
                                                                   :|...|....
  Rat   294 -------------------------------------------------------KLVQVNSRFN 303

  Fly   381 PPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCAC 445
            .|.::||||::|||.:|.:|...|.|||.||.||:||.|:|||.||||||||.:.:.|..|||.|
  Rat   304 SPTTQDLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTVQTERCHC 368

  Fly   446 TFHWCCEVKCKLC 458
            .|||||.||||.|
  Rat   369 KFHWCCYVKCKKC 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 146/403 (36%)
Wnt5aXP_006252726.1 Wnt_Wnt5a 80..391 CDD:381721 147/412 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48513
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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