DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and wnt6b

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_003199237.2 Gene:wnt6b / 561831 ZFINID:ZDB-GENE-070912-513 Length:355 Species:Danio rerio


Alignment Length:439 Identity:157/439 - (35%)
Similarity:218/439 - (49%) Gaps:117/439 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 MWWGIAKVGEPNNITPIMYMDPAIHSTLRR------KQRRLVRDNPGVLGALVKGANLAISECQH 95
            :||.   ||.|      :.|||  :|..|:      ||..|.:..|.::..:.|||.|.:.|||:
Zfish    25 LWWA---VGSP------LVMDP--NSICRKTKRLAGKQAELCQTQPEIVNEVAKGAKLGVRECQY 78

  Fly    96 QFRNRRWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSH 160
            |||.|||||:::|     ..||||:.:..|||:|:||||:|.|||::.:|||.|.:..|.|:.:.
Zfish    79 QFRFRRWNCTSQN-----KYFGKILQQDIRETAFVYAITAAGVTHAVTQACSMGELLQCGCEATR 138

  Fly   161 QSRSPQANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFVDTGER-GR-NLREKMNLHNNEAGRA 223
            ....|......|...||: ||||||.|::.||::.|::|:|...| |: ::|..::||||||||.
Zfish   139 SRGPPPRLASMGPTEGVK-WEWGGCGDDVEFGYEKSKQFMDARRRKGKSDIRTLIDLHNNEAGRL 202

  Fly   224 HVQAEMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSP 288
            .|:..||.||||||:|||||::|||.::.:||.:||.|..||:||::|.                
Zfish   203 AVKNYMRTECKCHGLSGSCTLRTCWKKMPHFREVGDRLLERFNGASKVM---------------- 251

  Fly   289 NAAGSNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQR 353
                                                                             
Zfish   252 ----------------------------------------------------------------- 251

  Fly   354 GGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSL 418
            ||.:|:           .|.|.....|||..:||:|...||.||..|.:.|.|||.||.||.|:|
Zfish   252 GGNDGK-----------TLIPVGQNIKPPDKQDLIYSAESPDFCLPNRKTGSLGTRGRTCNSTAL 305

  Fly   419 GVDGCGLMCCGRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTC 467
            .|.||.|:||.||:|.:.||:.|.|.|.|||||.|:||.|..:|.:..|
Zfish   306 DVSGCDLLCCERGHRDETVVLEENCLCRFHWCCVVQCKKCLVRKELSLC 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 148/412 (36%)
wnt6bXP_003199237.2 wnt 47..354 CDD:278536 146/404 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D280593at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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