DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wg and Wnt10

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster


Alignment Length:524 Identity:153/524 - (29%)
Similarity:230/524 - (43%) Gaps:121/524 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SGGSSLSQVEGKQKSGRGRGSMWWGIAKVGEPNNI--TPI---------------------MYMD 57
            |.|....|:..:||..:..||   ..:.....||:  ||.                     :|..
  Fly     8 SKGHEQQQLPQQQKQQQEAGS---SSSSNSSSNNLVATPATSRHCNLHLIVMIILACCTRWLYGL 69

  Fly    58 PAIHSTLR------RKQRRLVRDNPGVLGALVKGANLAISECQHQFRNRRWNCSTRNFSRGKNLF 116
            |...:|.|      :.|..|......|..|.::|.::||.|||.||:..|||||:.:........
  Fly    70 PDGRATCRSVPGLTKDQVELCYKASDVTAAALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHA 134

  Fly   117 GKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCD------------------------ 157
            ..::.:|.||::|.:||::|.|.||:|||||:|.:.||.||                        
  Fly   135 SSLLKKGYRESAFAFAISAAGVAHSVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFL 199

  Fly   158 ---YSHQSRSP--QANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFVDTGERGRNLREKMNLHN 217
               .::|..:|  :..::...:|.  .|:|||||.|:.||.::|:.|:|..|:..:::.|:||||
  Fly   200 QYLETNQILTPEEEKKYERSKIAS--RWKWGGCSHNMDFGVEYSKLFLDCREKAGDIQSKINLHN 262

  Fly   218 NEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNA 282
            |.|||..|...|...||||||||||.:||||....:|.::|..||.:|..|              
  Fly   263 NHAGRIAVSNNMEFRCKCHGMSGSCQLKTCWKSAPDFHIVGKVLKHQFRKA-------------- 313

  Fly   283 LAPVSPNAAGSNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSL 347
                              :::.||.|..||          |.::|:.:.  :|..:....|.::.
  Fly   314 ------------------ILVDQSNLGNGE----------PVVVLKRAR--NKKSNGGSGSGSTS 348

  Fly   348 P---QAGQRGGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKD-----------LVYLEPSPSFCE 398
            |   .....||.:....|....|.|.:|.......:|...|:           |.|.:.||:|||
  Fly   349 PDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKNAARMARKLETSLFYYQRSPNFCE 413

  Fly   399 KNLRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKV 463
            ::|...|.||.||:||..:...|||..:|||||:.:......|||.|.|.|||.|:|:.|..::.
  Fly   414 RDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQWCCNVECEECHVEEW 478

  Fly   464 IYTC 467
            |..|
  Fly   479 ISIC 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 139/453 (31%)
Wnt10NP_609109.3 wnt 82..466 CDD:278536 131/429 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456816
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D68684at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.