DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and Wnt6

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001101696.1 Gene:Wnt6 / 316526 RGDID:1304559 Length:365 Species:Rattus norvegicus


Alignment Length:452 Identity:154/452 - (34%)
Similarity:213/452 - (47%) Gaps:127/452 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GSMWWGIAKVGEPNNITPIMYMDPAIHSTLRRKQRRLV-------RDNPGVLGALVKGANLAISE 92
            |.:||.   ||.|      :.|||   :::.||.|||.       :..|.|:..|.:||.|.:.|
  Rat    23 GGLWWA---VGSP------LVMDP---TSICRKARRLAGRQAELCQAEPEVVAELARGARLGVRE 75

  Fly    93 CQHQFRNRRWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCD 157
            ||.|||.||||||:.:     ..||:::.:..|||:|::|||:|..:|::.:|||.|.:..|.|.
  Rat    76 CQFQFRFRRWNCSSHS-----KAFGRVLQQDIRETAFVFAITAAGASHAVTQACSMGELLQCGCQ 135

  Fly   158 YSHQSRSPQANHQAGS-----VAGVRD----WEWGGCSDNIGFGFKFSREFVDT-GERGR-NLRE 211
            .......|:.:...|:     ..|..|    ||||||.|::.||.:.||.|:|. .:||| ::|.
  Rat   136 APRGRAPPRPSGLLGTPGPPGPTGSPDASAAWEWGGCGDDVDFGDEKSRLFMDAQHKRGRGDIRA 200

  Fly   212 KMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNS 276
            .:.||||||||..|::..|.||||||:||||.::|||.:|..||.:|..|..||.||:||..||.
  Rat   201 LVQLHNNEAGRLAVRSHTRTECKCHGLSGSCALRTCWQKLPPFREVGARLLERFHGASRVMGTND 265

  Fly   277 LRATNALAPVSPNAAGSNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNM 341
            .:|.                                                            :
  Rat   266 GKAL------------------------------------------------------------L 270

  Fly   342 PSPNSLPQAGQRGGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGIL 406
            |:..:|                                ||||..||:|...||.||..|.|.|..
  Rat   271 PAVRTL--------------------------------KPPGRADLLYAADSPDFCAPNRRTGSP 303

  Fly   407 GTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTCL 468
            ||.||.||.::..:.||.|:|||||:|::.|.:.|.|.|.|||||.|:|..||.:|.:..||
  Rat   304 GTRGRACNSSAPDLSGCDLLCCGRGHRQESVQLEENCLCRFHWCCVVQCHRCRVRKELSLCL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 143/421 (34%)
Wnt6NP_001101696.1 Wnt_Wnt6 35..365 CDD:381712 146/429 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D280593at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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