DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wg and Wnt8b

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_006231504.1 Gene:Wnt8b / 293990 RGDID:1307644 Length:368 Species:Rattus norvegicus


Alignment Length:401 Identity:123/401 - (30%)
Similarity:174/401 - (43%) Gaps:123/401 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ALVKGANLAISECQHQFRNRRWNCSTRNFS-------RGKNLFGKIVDRGCRETSFIYAITSAAV 138
            ::..||...|.||::||...||||..|...       |..|          |||:|::||:||.|
  Rat    59 SVAAGAQSGIEECKYQFAWDRWNCPERALQLSSHGGLRSAN----------RETAFVHAISSAGV 113

  Fly   139 THSIARACSEGTIESCTCDYSHQSRSPQANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFVDTG 203
            .:::.|.||.|..::|.||   .||:.|        .|.:.|.|||||||:|||...|::|||..
  Rat   114 MYTLTRNCSLGDFDNCGCD---DSRNGQ--------LGGQGWLWGGCSDNVGFGEAISKQFVDAL 167

  Fly   204 ERGRNLREKMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGA 268
            |.|::.|..||||||||||..|:..|::.|||||:|||||.:|||::|..||.:|.:||.::..|
  Rat   168 ETGQDARAAMNLHNNEAGRKAVKGTMKRTCKCHGVSGSCTTQTCWLQLPEFREVGAHLKEKYHAA 232

  Fly   269 TRVQVTNSLRATNALAPVSPNAAGSNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPI 333
            .:|.:.              ..||:::.|...                         :.:....|
  Rat   233 LKVDLL--------------QGAGNSAAGRGA-------------------------IADTFRSI 258

  Fly   334 SKIHHPNMPSPNSLPQAGQRGGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCE 398
            |                                                 :::||:||.||.:|.
  Rat   259 S-------------------------------------------------TRELVHLEDSPDYCL 274

  Fly   399 KNLRQGILGTHGRQCNETSLGVD-----GCGLMC--CGRGYRRDEVVVVERCACTFHWCCEVKCK 456
            :|...|:|||.||:|......:.     .|..:|  ||..........|..|.|.|||||.|:|:
  Rat   275 ENKTLGLLGTEGRECLRRGRALGRWERRSCRRLCGDCGLAVEERRAETVSSCNCKFHWCCAVRCE 339

  Fly   457 LCRTKKVIYTC 467
            .||.:...|.|
  Rat   340 QCRRRVTKYFC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 123/401 (31%)
Wnt8bXP_006231504.1 WNT1 39..350 CDD:128408 122/399 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.