DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and Wnt5b

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001093959.1 Gene:Wnt5b / 282582 RGDID:628850 Length:372 Species:Rattus norvegicus


Alignment Length:477 Identity:167/477 - (35%)
Similarity:223/477 - (46%) Gaps:140/477 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IFVICLMALCSGGSSLSQVEGKQKSGRGRGSMWWGIA--KVGEPN----NITPIMYMDPAIHSTL 64
            :||..|:      ||.:|:.....|       ||.:|  .|..|.    ...|:....|.: |..
  Rat    20 LFVAALL------SSWAQLLTDANS-------WWSLALNPVQRPEMFIIGAQPVCSQLPGL-SPG 70

  Fly    65 RRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNRRWNCST-RNFSRGKNLFGKIVDRGCRETS 128
            :||..:|.:::...:|   :||...|.|||||||.||||||| .|.|    :||:::..|.|||:
  Rat    71 QRKLCQLYQEHMSYIG---EGAKTGIRECQHQFRQRRWNCSTVDNLS----VFGRVMQIGSRETA 128

  Fly   129 FIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSPQANHQAGSVAGVRDWEWGGCSDNIGFGF 193
            |.||:::|.|.::|:|||.||.:.:|.|     ||:.:.....      |||.||||.||:.:|:
  Rat   129 FTYAVSAAGVVNAISRACREGELSTCGC-----SRAARPKDLP------RDWLWGGCGDNVEYGY 182

  Fly   194 KFSREFVDTGERGRNL--------REKMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMR 250
            :|::||||..||.:|.        |..|||.||||||..|.......|||||:||||::||||::
  Rat   183 RFAKEFVDAREREKNFAKGSEEQGRALMNLQNNEAGRRAVYKMADVSCKCHGVSGSCSLKTCWLQ 247

  Fly   251 LANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGSNSVGSNGLIIPQSGLVYGEEEE 315
            ||.||.:||.||.::|.|..:::|                                         
  Rat   248 LAEFRKVGDRLKEKYDSAAAMRIT----------------------------------------- 271

  Fly   316 RMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRNGRRQGRKHNRYHFQLNPHNPEHK 380
                                                        |||:        |...|....
  Rat   272 --------------------------------------------RQGK--------LELTNSRFN 284

  Fly   381 PPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCAC 445
            .|..:||||::|||.:|.:|...|.|||.||.||:||.|.|||.||||||||.|.:.|.||||.|
  Rat   285 QPSPEDLVYVDPSPDYCLRNETTGSLGTQGRLCNKTSEGTDGCELMCCGRGYDRFKSVQVERCHC 349

  Fly   446 TFHWCCEVKCKLCRTKKVIYTC 467
            .|||||.|:||.|......|.|
  Rat   350 RFHWCCFVRCKKCTEIVDQYVC 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 152/413 (37%)
Wnt5bNP_001093959.1 Wnt 61..372 CDD:393294 154/423 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48513
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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