DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and Wnt2b

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001178777.1 Gene:Wnt2b / 116466 RGDID:69346 Length:391 Species:Rattus norvegicus


Alignment Length:434 Identity:154/434 - (35%)
Similarity:211/434 - (48%) Gaps:118/434 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 WWGIAKVGEP---NNITPIMYMDPAIHSTLRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRN 99
            ||.|..:|..   :||       |.:.|    :||:|.:..|.::.::.:||...|.|||||||:
  Rat    60 WWYIGALGARVICDNI-------PGLVS----RQRQLCQRYPDIMRSVGEGAREWIRECQHQFRH 113

  Fly   100 RRWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRS 164
            .||||:|  ..|...:||:.:.|..||.:|:|||:||.|.|:|.||||:|.:..|:||...:.|.
  Rat   114 HRWNCTT--LDRDHTVFGRAMLRSSREAAFVYAISSAGVVHAITRACSQGELSVCSCDPYTRGRH 176

  Fly   165 PQANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFVDTGE-RGRNLREKMNLHNNEAGRAHVQAE 228
               :.|.|      |::||||||||.:|.:|::.|||..| |.::.|..||||||..||..|:..
  Rat   177 ---HDQRG------DFDWGGCSDNIHYGVRFAKAFVDAKEKRLKDARALMNLHNNRCGRTAVRRF 232

  Fly   229 MRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGS 293
            ::.||||||:|||||::|||..|::||..||.|:.|:|||.:|..|..               |:
  Rat   233 LKLECKCHGVSGSCTLRTCWRALSDFRRTGDYLRRRYDGAVQVTATQD---------------GA 282

  Fly   294 NSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRNG 358
            |...:                                                            
  Rat   283 NFTAA------------------------------------------------------------ 287

  Fly   359 RRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDGC 423
             |||.:|                ....||||.:.||.:|..:...|.|||.||.|::||.|.|||
  Rat   288 -RQGYRH----------------ATRTDLVYFDNSPDYCVLDKAAGSLGTAGRVCSKTSKGTDGC 335

  Fly   424 GLMCCGRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTC 467
            .:|||||||....|..|.:|.|.|||||.|:||.||....::||
  Rat   336 EIMCCGRGYDTTRVTRVTQCECKFHWCCAVRCKECRNTVDVHTC 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 146/405 (36%)
Wnt2bNP_001178777.1 wnt 78..380 CDD:278536 147/409 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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