DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wg and wnt6

DIOPT Version :10

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_031749468.1 Gene:wnt6 / 101733784 XenbaseID:XB-GENE-486077 Length:321 Species:Xenopus tropicalis


Alignment Length:421 Identity:151/421 - (35%)
Similarity:212/421 - (50%) Gaps:108/421 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 MDPAIHSTLRR------KQRRLVRDNPGVLGALVKGANLAISECQHQFRNRRWNCSTRNFSRGKN 114
            |||  :|..|:      ||..|.:..|.::..:.|||.|.:.|||:|||:|||||::.|     .
 Frog     1 MDP--NSICRKTKRLAGKQAELCQTEPEIVSEVAKGAKLGVRECQYQFRSRRWNCTSHN-----K 58

  Fly   115 LFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSPQANHQAGSVAGVRD 179
            .||||:.:..|||:|:||||:|.|.|::.:|||.|.:..|.|:.: ::..|......|..|....
 Frog    59 YFGKILQQDIRETAFVYAITAAGVIHAVTQACSMGELLQCGCEVT-RNWGPPPPLAIGPGADGSA 122

  Fly   180 WEWGGCSDNIGFGFKFSREFVDT-GERGR-NLREKMNLHNNEAGRAHVQAEMRQECKCHGMSGSC 242
            ||||||.|::.:|::.||:|:|. .::|: ::|..::||||||||..|:..||.||||||:||||
 Frog   123 WEWGGCGDDVEYGYEKSRQFMDAKRKKGKSDIRTLIDLHNNEAGRLAVKNYMRTECKCHGLSGSC 187

  Fly   243 TVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGSNSVGSNGLIIPQSG 307
            |::|||.::.:||.:||.|..||:||.:|.                                   
 Frog   188 TLRTCWKKMPHFREVGDRLLERFNGAFKVM----------------------------------- 217

  Fly   308 LVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRNGRRQGRKHNRYHFQL 372
                                                          ||.:|:           .:
 Frog   218 ----------------------------------------------GGNDGK-----------TI 225

  Fly   373 NPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEV 437
            .|.....|||..:||:|...||.||:.|.:.|..||.||.||.|:|.|.||.|:|||||:|.:.|
 Frog   226 IPVGHNIKPPDKQDLIYSAESPDFCQANRKTGSPGTRGRVCNSTALDVGGCDLLCCGRGHREETV 290

  Fly   438 VVVERCACTFHWCCEVKCKLCRTKKVIYTCL 468
            ||.|.|.|.|||||.|:||.|..||.:..||
 Frog   291 VVEENCLCRFHWCCVVQCKKCTVKKELSVCL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 145/411 (35%)
wnt6XP_031749468.1 Wnt_Wnt6 1..321 CDD:381712 149/419 (36%)

Return to query results.
Submit another query.