DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and wnt2b

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_004910783.1 Gene:wnt2b / 100491761 XenbaseID:XB-GENE-960148 Length:392 Species:Xenopus tropicalis


Alignment Length:471 Identity:157/471 - (33%)
Similarity:226/471 - (47%) Gaps:136/471 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDISYIFVICLMALCSGGSSLSQVEGKQKSGRGRGSMWWGIAKVGEP---NNITPIMYMDPAIHS 62
            |..:||.::.::.        .:|:          |.||.|..:|..   :||..::        
 Frog    42 MHFAYILILLILT--------PRVD----------SSWWYIGALGARVICDNIPGLV-------- 80

  Fly    63 TLRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNRRWNCSTRNFSRGKNLFGKIVDRGCRET 127
               .|||:|.:.:|.::.|:.:||...|.|||||||:.||||||  ..|...:||:.:.|..|||
 Frog    81 ---NKQRQLCQKHPDIMQAIGEGAKEWIRECQHQFRHHRWNCST--LDRDHTVFGRAMLRSSRET 140

  Fly   128 SFIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSPQANHQAGSVAGVRDWEWGGCSDNIGFG 192
            :|:|||:.|.|.:::.||||:|.::||:||...:.||   ..:.|      :::||||||:|.||
 Frog   141 AFVYAISYAGVVYALTRACSQGELKSCSCDPKKRGRS---KDERG------EFDWGGCSDHIDFG 196

  Fly   193 FKFSREFVDTGE-RGRNLREKMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMRLANFRV 256
            .||:::|||..| |.::.|..||||||..||..|:..|..||||||:|||||::|||..:::||.
 Frog   197 IKFAKDFVDAKEKRLKDARALMNLHNNRCGRMAVKRFMNLECKCHGVSGSCTLRTCWRAMSDFRK 261

  Fly   257 IGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGSNSVGSNGLIIPQSGLVYGEEEERMLNDH 321
            .||.|:.:::||  :|||             .|..||....:|                      
 Frog   262 TGDFLRRKYNGA--IQVT-------------MNQDGSGFAVAN---------------------- 289

  Fly   322 MPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKD 386
                                              :|.|:..:                     ||
 Frog   290 ----------------------------------QNFRKATK---------------------KD 299

  Fly   387 LVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCACTFHWCC 451
            |||.|.||.:|..:...|.|||.||.|::.|.|.|||.:|||||||....|..:.:|.|.|||||
 Frog   300 LVYFENSPDYCLMDKTAGSLGTAGRVCDKVSRGTDGCEVMCCGRGYDTTRVTRITKCECKFHWCC 364

  Fly   452 EVKCKLCRTKKVIYTC 467
            .|:||.|.....::||
 Frog   365 AVRCKECEETVDVHTC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 146/405 (36%)
wnt2bXP_004910783.1 Wnt_Wnt2b 68..381 CDD:381720 149/427 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47640
Panther 1 1.100 - - O PTHR12027
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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