DRSC/TRiP Functional Genomics Resources

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Protein Alignment wg and wnt4

DIOPT Version :9

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001239015.1 Gene:wnt4 / 100491282 XenbaseID:XB-GENE-484098 Length:351 Species:Xenopus tropicalis


Alignment Length:435 Identity:164/435 - (37%)
Similarity:222/435 - (51%) Gaps:110/435 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SMWWGIAKVGEPNNITPIMYMDPAIHSTLRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNR 100
            |.|..:||:....:|:.....:..  ..|.::|.::.:.|..|:.::.:||.|||.|||:|||||
 Frog    23 SNWLYLAKLSSVGSISEEETCEKL--KGLIQRQVQMCKRNLEVMDSVRRGAQLAIEECQYQFRNR 85

  Fly   101 RWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSP 165
            ||||||.:   ...:|||:|.:|.||.:|:|||:||.|..: .||||.|.:|.|.||.:....||
 Frog    86 RWNCSTLD---SLPVFGKVVTQGTREAAFVYAISSAGVAFAXTRACSSGDLEKCGCDRTVHGVSP 147

  Fly   166 QANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFVDTGER---GRNLREKMNLHNNEAGRAHVQA 227
            |.            ::|.||||||.:|..||:.|||..||   |.:.|..||||||:|||..:..
 Frog   148 QG------------FQWSGCSDNIAYGVAFSQSFVDVRERSKGGSSSRALMNLHNNDAGRKAILN 200

  Fly   228 EMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAG 292
            .||.||||||:||||.|||||..:..||.:|:.||.:|||||.|:                    
 Frog   201 NMRVECKCHGVSGSCEVKTCWKAMPTFRKVGNVLKEKFDGATEVE-------------------- 245

  Fly   293 SNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRN 357
            ...:||..:::|::.                                                  
 Frog   246 QKKIGSTKVLVPKNS-------------------------------------------------- 260

  Fly   358 GRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDG 422
                         |. ||..|       |||||:.||.||:.:|:.|:|||.|||||:||..:||
 Frog   261 -------------QFXPHTDE-------DLVYLDSSPDFCDHDLKNGVLGTTGRQCNKTSKAIDG 305

  Fly   423 CGLMCCGRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTC 467
            |.|||||||:..:||.::|||:|.|||||.||||.|.....::||
 Frog   306 CELMCCGRGFHTEEVEIIERCSCKFHWCCFVKCKQCHKVVEMHTC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 159/407 (39%)
wnt4NP_001239015.1 WNT1 45..351 CDD:128408 159/413 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47640
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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