DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wg and wnt16

DIOPT Version :10

Sequence 1:NP_523502.1 Gene:wg / 34009 FlyBaseID:FBgn0284084 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001096551.1 Gene:wnt16 / 100125197 XenbaseID:XB-GENE-484267 Length:376 Species:Xenopus tropicalis


Alignment Length:494 Identity:151/494 - (30%)
Similarity:222/494 - (44%) Gaps:156/494 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ISYIFVI--CLMALCSGGSSLSQVEGKQKSGRGRGS-MWWGIAKVGEPNNI----TPIMYMDPAI 60
            :|:|.|:  .|||:.    .|||           |: ||.|:...|.|..:    .|:.:     
 Frog     9 LSHICVLLTALMAIL----PLSQ-----------GNWMWLGVTSFGVPEKLGCTNLPLSF----- 53

  Fly    61 HSTLRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNRRWNCS-----------------TRN 108
                  .|:.:.|..|.:|.::.:||.|.|.||::||::.|||||                 |.:
 Frog    54 ------HQKEMCRKKPYLLSSIREGARLGIHECRNQFKHERWNCSVSPTISSASSSFSLSFITSS 112

  Fly   109 FSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSPQANHQAGS 173
            .:....:||..:..|.:||:||.|:|:|.:.||:.||||.|.:..|:||.|.|:        .||
 Frog   113 LASAHTIFGYELSSGTKETAFISAVTAAGLVHSVTRACSAGNMTECSCDTSLQN--------GGS 169

  Fly   174 VAGVRDWEWGGCSDNIGFGFKFSREFVD-----TGERGRNLREKMNLHNNEAGRAHVQAEMRQEC 233
            .:  ..|.||||||::.:|..|||:|:|     :..|..::...|:||||||||..|...|..:|
 Frog   170 AS--EGWHWGGCSDDLQYGMWFSRKFLDAPYKNSSGRDSDVLNAMHLHNNEAGRQAVTKLMTVDC 232

  Fly   234 KCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGSNSVGS 298
            :|||:||||.|||||..:::|..||:.||.:::.:  :|:.:.|:                    
 Frog   233 RCHGVSGSCAVKTCWKSMSSFEKIGNFLKNKYENS--IQIADRLK-------------------- 275

  Fly   299 NGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRNGRRQGR 363
                                                                     |..||:.:
 Frog   276 ---------------------------------------------------------RKVRRREK 283

  Fly   364 KHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKNLRQGILGTHGRQCNETSLGVDGCGLMCC 428
                        |....|....||||...||::|.::.:.||.|||||:||.||.|.|.|.|:||
 Frog   284 ------------NDRKIPIYKGDLVYTNKSPNYCVEDPKLGISGTHGRECNRTSEGSDSCNLLCC 336

  Fly   429 GRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTC 467
            ||||....|..||||.|.|.|||.|:|:.|.:...::||
 Frog   337 GRGYNTHVVRHVERCECKFVWCCYVRCRRCESMTDVHTC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgNP_523502.1 Wnt_Wnt1 64..468 CDD:381707 135/426 (32%)
wnt16NP_001096551.1 Wnt_Wnt16 51..376 CDD:381718 135/437 (31%)

Return to query results.
Submit another query.