DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt4 and Wnt10

DIOPT Version :9

Sequence 1:NP_001260187.1 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster


Alignment Length:460 Identity:126/460 - (27%)
Similarity:194/460 - (42%) Gaps:138/460 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 AGMGLGIGSNTNNMDMQQGL---YNEHFISEHTVMAVFT--SQGQVGGP-----CRYMPA-TRRQ 249
            ||......|::||:......   .|.|.|    ||.:..  ::...|.|     ||.:|. |:.|
  Fly    26 AGSSSSSNSSSNNLVATPATSRHCNLHLI----VMIILACCTRWLYGLPDGRATCRSVPGLTKDQ 86

  Fly   250 NHQCRKETGLPGTLSEARRLATTHCEEQFRYDRWNCSIETRGKRN-----IFKKLYKETAFVHAL 309
            ...|.|.:.:.....|...:|...|:.||::.|||||..:...||     :.||.|:|:||..|:
  Fly    87 VELCYKASDVTAAALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHASSLLKKGYRESAFAFAI 151

  Fly   310 TAAAMTHSIARACAEGRMTKCSCGP-------------------------------------KKH 337
            :||.:.||:||||::||:..|.|.|                                     ||:
  Fly   152 SAAGVAHSVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQYLETNQILTPEEEKKY 216

  Fly   338 NRE--AQDFQWGGCNDNLKHGKRVTRSFLDLRGGDGDEVSEILRHDSEVGIEAVSSQMMDKCKCH 400
            .|.  |..::||||:.|:..|...::.|||.|...||..|:|..|::..|..|||:.|..:||||
  Fly   217 ERSKIASRWKWGGCSHNMDFGVEYSKLFLDCREKAGDIQSKINLHNNHAGRIAVSNNMEFRCKCH 281

  Fly   401 GVSGSCSMKTCWKKMADFNATATLLRQKYNEAI----------------RKAPN----------- 438
            |:||||.:|||||...||:....:|:.::.:||                ::|.|           
  Fly   282 GMSGSCQLKTCWKSAPDFHIVGKVLKHQFRKAILVDQSNLGNGEPVVVLKRARNKKSNGGSGSGS 346

  Fly   439 --------------------------------QRSMRQVSSSRMKKPKQRRKKPQQSQYTTLYYL 471
                                            :|..||.|:.:......|:.:      |:|:|.
  Fly   347 TSPDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKNAARMARKLE------TSLFYY 405

  Fly   472 ETSPSYC--------AVTKDRQC----LHPDNCGTLCCGRGYTTQVVKQVEKCRCRFNNGRCCQL 524
            :.||::|        ..|..|:|    ...|.|.:||||||::..:.::.|:|.|:|.  .||.:
  Fly   406 QRSPNFCERDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHSQVIQRRAERCHCKFQ--WCCNV 468

  Fly   525 ICDYC 529
            .|:.|
  Fly   469 ECEEC 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt4NP_001260187.1 wnt 246..539 CDD:278536 111/399 (28%)
Wnt10NP_609109.3 wnt 82..466 CDD:278536 107/391 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456820
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D68684at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.