DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt4 and Wnt5

DIOPT Version :9

Sequence 1:NP_001260187.1 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster


Alignment Length:714 Identity:151/714 - (21%)
Similarity:222/714 - (31%) Gaps:306/714 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NPAIHHQQHQQHQQHQQHQQH----QSNHNLNNGNMN---STILNTLMGNNAGQVV--------- 90
            :|....|:.::.||.|:.:..    ||.:      |.   ..|:.|:  ||..:..         
  Fly   381 SPKCIRQRRREEQQRQRERDEWFRGQSQY------MQPRFEPIIQTI--NNTKRFAVSIEIPDSF 437

  Fly    91 -NSSPGGGGSMINQLGSSTSSVPSVIGGGVGSVGNPWHSAVGLGVPGN---------GMGLPSS- 144
             .||.|..|.:::::..|..|:.|.......|........:.:.:..|         .:.:.|: 
  Fly   438 KVSSEGSDGELLSRVERSQPSISSSSSSSSSSSRKIMPDYIKVSMENNTSVTDYFKHDVVMTSAD 502

  Fly   145 --------------HGLGGNMGSHPHGHALAGLAKLGIIVPGGQGLPGNLGYGGTMLNGGGVGGA 195
                          ||..|:..|| |...                .|....|..|          
  Fly   503 VASDREFLIKNMEEHGGAGSANSH-HNDT----------------TPTADAYSET---------- 540

  Fly   196 AGMGLGIGSNTNNMDMQQGLYNEHFISEHTVMAVFTSQGQVGGPCRYMPATRRQNHQCRKETGLP 260
                  |..|.||.....||.|.                              |..||.|.|.:.
  Fly   541 ------IDLNPNNCYSAIGLSNS------------------------------QKKQCVKHTSVM 569

  Fly   261 GTLSEARRLATTHCEEQFRYDRWNCSIETRGKRNIFKKLYK----ETAFVHALTAAAMTHSIARA 321
            ..:|...|.|...|:.||:..|||||  |.....:|..:..    |.||:|||.||.:|..||||
  Fly   570 PAISRGARAAIQECQFQFKNRRWNCS--TTNDETVFGPMTSLAAPEMAFIHALAAATVTSFIARA 632

  Fly   322 CAEGRMTKCSCG----PKK-HNREAQDFQWGGCNDNLKHGKRVTRSFLDLRGGDGD--------- 372
            |.:|::..|||.    ||: |:    |::||||.|||:...:....|:|.|..:.:         
  Fly   633 CRDGQLASCSCSRGSRPKQLHD----DWKWGGCGDNLEFAYKFATDFIDSREKETNRETRGVKRK 693

  Fly   373 ----------------------------------------------EVSEILR------------ 379
                                                          |.|.||.            
  Fly   694 REEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENSHILNENFDQHLLELEQ 758

  Fly   380 ----------------------------------------------------------------- 379
                                                                             
  Fly   759 RITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRAAADAPAYPRNGIKESY 823

  Fly   380 ---------------------HDSEVGIEAVSSQMMDKCKCHGVSGSCSMKTCWKKMADFNATAT 423
                                 |::|.|..||..:....|||||||||||:.|||::::.......
  Fly   824 KDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCSLITCWQQLSSIREIGD 888

  Fly   424 LLRQKYNEAIRKAPNQRSMRQVSSSRMKKPKQRRKKPQQSQYTTLYYLETSPSYC--------AV 480
            .||:||..|.:...|:|...|:...:.|.|...          .|.||:.||.:|        ..
  Fly   889 YLREKYEGATKVKINKRGRLQIKDLQFKVPTAH----------DLIYLDESPDWCRNSYALHWPG 943

  Fly   481 TKDRQCLHP-----DNCGTLCCGRGYTTQVVKQVEKCRCRFNNGRCCQLICDYCQRLENKYFCK 539
            |..|.| |.     ::|..|||||||.|:.:...|:|.|:|:  .|||:.|:.|.::..::.||
  Fly   944 THGRVC-HKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFH--WCCQVKCEVCTKVLEEHTCK 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt4NP_001260187.1 wnt 246..539 CDD:278536 111/467 (24%)
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 113/498 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456819
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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