DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt4 and Wnt9b

DIOPT Version :9

Sequence 1:NP_001260187.1 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001100525.1 Gene:Wnt9b / 303586 RGDID:1309574 Length:359 Species:Rattus norvegicus


Alignment Length:340 Identity:123/340 - (36%)
Similarity:181/340 - (53%) Gaps:41/340 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 VMAVFTSQGQVGGP---------CRYMPATRRQNHQCRKETGLPGTLSEARRLATTHCEEQFRYD 281
            |:..|...|....|         |..:..:|.|...||:|.||..||.:|..|....|:.|||.:
  Rat    34 VLTPFPGPGTAAAPAQAGAHLKQCDLLKLSRWQKQLCRREPGLAETLRDAAHLGLLECQFQFRQE 98

  Fly   282 RWNCSIETRGKRNIFKKLYKETAFVHALTAAAMTHSIARACAEGRMTKCSCGPKKHNREAQDFQW 346
            |||||:|  |:..:.::.:|||||::|::|||:||::||||:.|||.:|:|.........|.:||
  Rat    99 RWNCSLE--GRTGLLQRGFKETAFLYAVSAAALTHALARACSAGRMERCTCDDSPGLESRQAWQW 161

  Fly   347 GGCNDNLKHGKRVTRSFLDLRGGDGDEVSEILRHDSEVGIEAVSSQMMDKCKCHGVSGSCSMKTC 411
            |.|.||||:..:...:||..:.|..|..:....|::.|||:||.|.:...||||||||||:::||
  Rat   162 GVCGDNLKYSTKFLSNFLGPKRGSKDLRARADAHNTHVGIKAVKSGLRTTCKCHGVSGSCAVRTC 226

  Fly   412 WKKMADFNATATLLRQKYNEAIR--KAPNQRSMRQVSSSRMK-----KP----KQRRKKPQQSQY 465
            ||:::.|..|..:|:.:|:.|::  .|.|:      :..|::     ||    |....:|     
  Rat   227 WKQLSPFRETGQVLKLRYDTAVKVSSATNE------ALGRLELWVPAKPGGPAKGLAPRP----- 280

  Fly   466 TTLYYLETSPSYCAVTK------DRQCLHPDNCGTLCCGRGYTTQVVKQVEKCRCRFNNGRCCQL 524
            ..|.|:|.|||:|..:|      .|.|....:|.:|||||||.||.......|.|:..  .||.:
  Rat   281 VDLVYMEDSPSFCRPSKYSPGTAGRVCSRDTSCSSLCCGRGYDTQSRMVAFSCHCQVQ--WCCYV 343

  Fly   525 ICDYCQRLENKYFCK 539
            .|..|.:.|..|.||
  Rat   344 ECQQCAQQELVYTCK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt4NP_001260187.1 wnt 246..539 CDD:278536 116/309 (38%)
Wnt9bNP_001100525.1 wnt 62..358 CDD:278536 116/310 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 222 1.000 Domainoid score I2513
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 223 1.000 Inparanoid score I3430
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003784
OrthoInspector 1 1.000 - - otm45933
orthoMCL 1 0.900 - - OOG6_111860
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4229
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.760

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